Gene Information

Name : SPAB_03326 (SPAB_03326)
Accession : YP_001589517.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 2789895 - 2790770 bp
Length : 876 bp
Strand : +
Note : KEGG: hpa:HPAG1_0820 3.0e-05 GTP-binding protein-like protein K00058; COG: COG3596 Predicted GTPase; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGACTAAACCTCACGGCCTTCAGGCCCTGGAACAACCGCTGTCGGCGCTTCCCGATACGCTTCGTCAGCTTATTCTTGA
ACGTATTCAGAACCTCACCCACTACGAGCCGGTGATTGGCATCATGGGCAAGAGCGGTGCGGGTAAGTCTTCGCTCTGTA
ATGAACTCTTCCGGGGTGAGGTCTCCCCCATCAGTGATGTGAACGCCTGTACCCGTGACGTGCTGCGCTTCCGGTTGCGC
AGCGGTCGTCACAGTCTGATGATTGTTGATTTACCGGGTGTGGGAGAAAACGGGCTGCGGGACCAGGAATACCGTGCCCT
GTACCGGCGTATGCTGCCGGAGCTGGACCTGGTGCTGTGGGTCATTAAAGCCGACGACCGGGCGCTGTCAGTAGACGAGC
AGTTCTGGCATGGGGTGATGCAACCTTACCAGCAGCAGGTGCTGTTTGTGCTGAACCAGGCTGACAAAATCGAACCCTGC
CACGAATGGGATATCCGCACCAGTACCCCCTCGCCACAGCAGCAGACTAACCTGAAGGCGAAACAGGCCGCCATTACCAC
GATATTCACTCCCCGTCATCCGGTCTGCATGGTGTCAGCGTTGACCGGTTGGGGCGTGGAAGCGATGGTGGCAACCATGA
TGCGCTGTCTGCCGGACCATGCCACCAGCCCGGTGGCGACACAACTGCACGGGAGGCTCTGCACCGGGCCGGTCAGGTCA
CAGGCCCGTGATAGCTTCGGTGAGGCCGTGGGGCGGGTGTTCGATACGGCAGAATCATCGTCGTTTCTGCCTGCGCCGCT
GAAGACTGTGATACGTACCGTGCGTGATGCGGTGGTGTCCGTGGCCCGCGCGGTCTGGGACTGGATTTTCTTCTGA

Protein sequence :
MTKPHGLQALEQPLSALPDTLRQLILERIQNLTHYEPVIGIMGKSGAGKSSLCNELFRGEVSPISDVNACTRDVLRFRLR
SGRHSLMIVDLPGVGENGLRDQEYRALYRRMLPELDLVLWVIKADDRALSVDEQFWHGVMQPYQQQVLFVLNQADKIEPC
HEWDIRTSTPSPQQQTNLKAKQAAITTIFTPRHPVCMVSALTGWGVEAMVATMMRCLPDHATSPVATQLHGRLCTGPVRS
QARDSFGEAVGRVFDTAESSSFLPAPLKTVIRTVRDAVVSVARAVWDWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL99256.1 unknown Not tested LEE Protein 5e-76 61
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 1e-75 60
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 8e-76 60
Z1210 NP_286745.1 histone Not tested TAI Protein 2e-76 60
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 2e-76 60
unnamed AAL08471.1 unknown Not tested SRL Protein 3e-76 60
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 1e-76 60
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 2e-75 60
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 2e-75 60
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 7e-76 60
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 7e-76 60
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 4e-76 60
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 8e-74 59
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 2e-49 42
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-49 41
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 9e-50 41
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-49 41
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 9e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_03326 YP_001589517.1 hypothetical protein VFG1062 Protein 2e-76 60
SPAB_03326 YP_001589517.1 hypothetical protein VFG0654 Protein 1e-75 60
SPAB_03326 YP_001589517.1 hypothetical protein VFG1674 Protein 7e-77 60
SPAB_03326 YP_001589517.1 hypothetical protein VFG1522 Protein 1e-49 42