Gene Information

Name : SPAB_03305 (SPAB_03305)
Accession : YP_001589498.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 2773762 - 2774367 bp
Length : 606 bp
Strand : -
Note : COG: COG3121 P pilus assembly protein, chaperone PapD; Psort location: cytoplasmic, score: 23

DNA sequence : 
GTGATTTATCACGCTGGTACACCCGGCGCGACGCTCTCGGTGAGCAACCCGCAGGATTACCCTATTTTGGTTCAGTCTTC
AGTCAAAGCAGAAGACAAAAATTCGCCAGCCCCCTTTATGGTGATGCCGCCTCTATTTCGTTTAGAAGCGAACCAGCAGA
GTCAACTGCGTATTATCCGTACTGGTGGTGACATGCCAACGGATCGTGAAACTTTACAGTGGGTCTGTATAAAGGCGGTA
CCACCCGAAAATGAACCGTCGGATACACAGGCTAAGGGCGCGACCCTTGACCTCAATTTGTCCATCAGCACCTGTGACAA
GCTGATTTTCCGCCCGGATGCCGTGAAGGGGACGCCGGAAGATGTTGCAGGAAATTTAAGATGGGTGGAGACGGGCAACA
AACTTAAGGTAGAGAACCCCACCCCGTTTTACATGAATTTAGCCTCTGTCACAGTAGGGGGAAAGCCCATTACAGGGCTT
GAGTATATCCCCCCCTTTGCTGACAAAACACTAAATATGCCAGGTGGCACTCGTGGTGATGTCGAGTGGAAAATTATTAC
AGACTTAGGTGGTGAAAGTCATCCGTTCCACTACGTTTTTAAATAA

Protein sequence : 
MIYHAGTPGATLSVSNPQDYPILVQSSVKAEDKNSPAPFMVMPPLFRLEANQQSQLRIIRTGGDMPTDRETLQWVCIKAV
PPENEPSDTQAKGATLDLNLSISTCDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGL
EYIPPFADKTLNMPGGTRGDVEWKIITDLGGESHPFHYVFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 2e-88 92
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 2e-49 51
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 2e-49 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_03305 YP_001589498.1 hypothetical protein VFG0943 Protein 4e-49 52
SPAB_03305 YP_001589498.1 hypothetical protein VFG0850 Protein 5e-51 50
SPAB_03305 YP_001589498.1 hypothetical protein VFG0858 Protein 1e-48 50
SPAB_03305 YP_001589498.1 hypothetical protein VFG0852 Protein 1e-48 48
SPAB_03305 YP_001589498.1 hypothetical protein VFG0420 Protein 2e-39 42