Gene Information

Name : SPAB_03060 (SPAB_03060)
Accession : YP_001589255.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2550934 - 2551620 bp
Length : 687 bp
Strand : -
Note : KEGG: pen:PSEEN1885 7.8e-61 ABC transporter, ATP-binding protein; COG: COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGCCAGCGGAAAACAGTGTTGAAGTTCATCGTCTCAGGAAGTCCGTCGGTCAGAGTGAGCATGAGCTTTCCATCCTTAC
CGGAGTTGAACTGGTTGTCAAACGCGGCGAAACCATTGCGCTGATTGGCGAATCAGGATCGGGAAAATCTACGCTGCTGG
CGATTCTCGCCGGACTGGATGACGGCAGTAGCGGAGAGGTCAGTCTGGTCGGGAAACCGCTTCACCAGATGGACGAAGAG
GCGCGGGCGCAGCTTCGCGCTCAGCATGTCGGTTTTGTTTTTCAATCCTTCATGCTTATTCCTACGCTTAACGCGCTGGA
AAACGTTGAGCTACCGGCCCTGCTACGCGGTGAAAACAGCGGTCAGAGTAAGGCGGGGGCGAAAGCGCTGCTCGAACAAC
TGGGACTGGGAAAACGGCTTGACCACCTTCCGGCACAGCTTTCCGGCGGCGAACAGCAGCGCGTAGCGCTGGCGCGCGCG
TTTAACGGGCGTCCTGATGTGCTGTTTGCCGATGAGCCGACGGGCAACCTTGACCGTCAGACCGGAGATAAAATCGCCGA
CCTGCTATTTTCGCTTAACCGCGAGCACGGCACCACGCTGATTCTGGTGACGCACGACCCGGCGCTGGCGGCGCGCTGCG
ACCGGCGGCTGCGGTTGGTCAACGGTCAGTTACAGGAGGAGGCATGA

Protein sequence :
MPAENSVEVHRLRKSVGQSEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGKPLHQMDEE
ARAQLRAQHVGFVFQSFMLIPTLNALENVELPALLRGENSGQSKAGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDPALAARCDRRLRLVNGQLQEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_03060 YP_001589255.1 putative ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 1e-31 48
SPAB_03060 YP_001589255.1 putative ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 2e-37 46
SPAB_03060 YP_001589255.1 putative ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 7e-34 42
SPAB_03060 YP_001589255.1 putative ABC transporter ATP-binding protein YbbA NC_012469.1.7685735. Protein 2e-31 41