Gene Information

Name : SPAB_00029 (SPAB_00029)
Accession : YP_001586306.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 25130 - 25888 bp
Length : 759 bp
Strand : +
Note : COG: COG3121 P pilus assembly protein, chaperone PapD; Psort location: nuclear, score: 23

DNA sequence : 
TTGGGAGGCGAGAAAGGGGCGTTACGCGCGTCACTGCGCGTAACAAACCGACGGCATCAGGATATTACGCAGATGAAAAA
AAACTTACCGATTTTCCTTCGATTATTGCTACTGCTGTCGGCGGCCGGCCTGTCGTTTGCCGCGCAGGCGGGAGGCATTG
CGCTGGGCGCGACCAGGGTGATTTATCCGCAGGGAAGTAAGCAAACCTCCTTGCCGATTATTAATTCTTCTGCCAGCAAT
GTTTTTCTAATTCAGTCATGGGTCGCCAATGCCGATGGTTCACGCTCGACGGATTTTATCATTACGCCGCCTCTCTTTGT
GATCCAGCCTAAAAAAGAAAATATATTACGTATTATGTATGTCGGGCCGTCATTACCGACCGATCGCGAAAGCGTATTTT
ATTTAAACAGTAAAGCGATACCCTCTGTCGATAAAAATAAATTGACCGGCAACTCCCTGCAAATTGCGACGCAAAGCGTG
ATTAAGCTATTTATTCGCCCGAAAAATCTGGCGGAGGCGCCAGCTCATGCCCCGTCGACGCTTCGCTGCCGTAACGAGCG
CGGCCAGCTAACGATTACTAACCCTTCGCCGTACTACGTTTCGATGGTTGAACTGTACAGCGCGGGGAAAAAACTGCCGA
ATACTATGGTACCGCCGAAAGGCGCGATCACTCTCCCGGCGACGCCCGGCCAGGTATCTTTGCGCACGGTAAACGATTTT
GGCGCAACGACGCCAGCACGCGTTTGTCCAGCTTCATGA

Protein sequence : 
MGGEKGALRASLRVTNRRHQDITQMKKNLPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASN
VFLIQSWVANADGSRSTDFIITPPLFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSV
IKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDF
GATTPARVCPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 8e-45 51
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 4e-42 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_00029 YP_001586306.1 hypothetical protein VFG0875 Protein 4e-46 52
SPAB_00029 YP_001586306.1 hypothetical protein VFG0445 Protein 6e-48 51
SPAB_00029 YP_001586306.1 hypothetical protein VFG0911 Protein 2e-42 49
SPAB_00029 YP_001586306.1 hypothetical protein VFG1644 Protein 2e-42 49
SPAB_00029 YP_001586306.1 hypothetical protein VFG0455 Protein 7e-35 42