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Name : SPAB_00254 (SPAB_00254) Accession : YP_001586529.1 Strain : Salmonella enterica SGSC4150; SPB7 Genome accession: NC_010102 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 234881 - 235633 bp Length : 753 bp Strand : + Note : COG: COG3121 P pilus assembly protein, chaperone PapD; Psort location: extracellular, including cell wall, score: 9 DNA sequence : ATGATGCCATTAAAACGTTATAACCTGGCCGCTGTTTTGCTGCTTTTGCTGGGCGGCTACGGTAGCGCTCAAGCCGCCAT CGCGCCCGATCGCACCCGCCTGGTATTTCGCGGCGAAGATAAATCGATAAGCGTCGATCTGAAAAACGCCAACAGCAAAC TGCCCTATCTGGCGCAGTCCTGGGTGGAAGATGAGAAGGGCGTCAAAATCACCTCGCCTTTAATCGTCGTCCCACCGGTC CAGCGCATTGAGCCGTCGGCAATCGGACAGGTCAAAATTCAGGGGATGCCGGCGCTGGCGTCGCTTCCCCAGGATCGGGA AACCCTTTTTTATTACAACGTGCGCGAAATTCCGCCGCAAAGCGACAAGCCCAATACGCTGCAAATCGCCCTGCAAACGC GCATCAAAGTTTTTTACCGCCCGCAGGCGCTATCGAAAATCGATATGCAGCATCCCTGGCAATACAAGATCACCCTTCAG CGTCAGGGCAATGGCTATCAGGTGAGCAATCCGACCGGTTACTACGTGGTGTTAAGCAACGCCAGCAGCCGCATGGACGG CACACCGGCCAGAGGCTTTAGCCCATTAGTGATTGCACCAAAAAGCAACGTGACGCTGGGAGGGGACGCCAGTGAATTAG GTCACTCGCCTGTGCTGACTTACGTCAACGATTATGGCGCGCGGTTACCGCTGATTTTTAGCTGTACTGACAACAGTTGT GCGGTAGATGAAGCAAAAAGCAGAAAGTCGTAA Protein sequence : MMPLKRYNLAAVLLLLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVVPPV QRIEPSAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQ RQGNGYQVSNPTGYYVVLSNASSRMDGTPARGFSPLVIAPKSNVTLGGDASELGHSPVLTYVNDYGARLPLIFSCTDNSC AVDEAKSRKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 3e-48 | 45 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 4e-48 | 45 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 6e-48 | 45 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 8e-49 | 45 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 8e-48 | 44 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 8e-48 | 44 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 6e-48 | 44 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 4e-43 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SPAB_00254 | YP_001586529.1 | hypothetical protein | VFG1547 | Protein | 2e-48 | 45 |
| SPAB_00254 | YP_001586529.1 | hypothetical protein | VFG0896 | Protein | 3e-48 | 44 |
| SPAB_00254 | YP_001586529.1 | hypothetical protein | VFG0885 | Protein | 2e-43 | 43 |
