Gene Information

Name : SPAB_00231 (SPAB_00231)
Accession : YP_001586506.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : putative chaperone protein EcpD
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 212247 - 212984 bp
Length : 738 bp
Strand : -
Note : COG: COG3121 P pilus assembly protein, chaperone PapD; Psort location: extracellular, including cell wall, score: 9

DNA sequence : 
ATGTCTCACTCTTTAAAGTTTACTTTGTCTGCTATCGCTCTGACCGGGGCATTATTTAGCTCTGCCAGCCAGGCCGATAT
TATTATTTCTGGCACGCGTATTATTTATGATGCAAATAAAAAAGATGTCAGCGTACGTCTGGAAAATAAAGGTAAAAGCC
CATTATTAGTTCAGAACTGGATAGATCTCGGCAATGATAATGCCGAGCCGGGCAGTATTAAAGCGCCCTTCGCCGCCACG
CCGCCGGTATCACGAATAGAACCTAAGCGCGGGCAGTCGATAAAAATTATGTATACCGCCACAGAATCGCTACCGAAAGA
TCGCGAAAGCGTTTTCTGGTTCAACGTGCTGGAAGTTCCACCGAAGGCAAATACCAACCAGGAAGAAAATAAGAATTTGC
TCCAGCTGGCGTTTCGCACCCGCATCAAACTATTTTATCGCCCGACGGGTTTACCGGGCGCCCCGGCAGAAGCGGCAAAA
CAGCTGAAATGGCAGGTCGCCAGCGAACAGGGCCATGCCGTTCTTCGCGCCGATAACCCGACTCCGTATTACGTCTCCTT
TAACTCTGCCACCTACACCAGCGGCGGAAAACGCTATGACGTCGACGCGACCATGGTTGCCCCCTTTGGCAAAGCCGCCT
TCACGGTGAAAGGACTGCAAAACGCCAGCGCAGGCAAACTGGAATTCCAGTCCATTAATGACTACGGCGGCATCATCGCT
GGCTCAGCTTCACTGTAA

Protein sequence : 
MSHSLKFTLSAIALTGALFSSASQADIIISGTRIIYDANKKDVSVRLENKGKSPLLVQNWIDLGNDNAEPGSIKAPFAAT
PPVSRIEPKRGQSIKIMYTATESLPKDRESVFWFNVLEVPPKANTNQEENKNLLQLAFRTRIKLFYRPTGLPGAPAEAAK
QLKWQVASEQGHAVLRADNPTPYYVSFNSATYTSGGKRYDVDATMVAPFGKAAFTVKGLQNASAGKLEFQSINDYGGIIA
GSASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 1e-71 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_00231 YP_001586506.1 putative chaperone protein EcpD VFG1145 Protein 1e-40 43
SPAB_00231 YP_001586506.1 putative chaperone protein EcpD VFG0007 Protein 5e-42 41