Gene Information

Name : SPAB_00215 (SPAB_00215)
Accession : YP_001586490.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 200762 - 201445 bp
Length : 684 bp
Strand : -
Note : COG: COG3121 P pilus assembly protein, chaperone PapD; Psort location: extracellular, including cell wall, score: 9

DNA sequence :
ATGAATTCATTGGCTAAAGCAGGGTTGCTTTGTTGCCTGTTGTGCGGTTCGCTGGCGCATGCCGCAGGGATAAACATCGG
CGCAACGCGGGTTATTTTTCACGGCGATGCCAAAGATGCATCCATATCGATAAGCAATAGCGACAACGTTCCCTATTTAA
TTCAGTCCTGGGCGCAATCGATCAGCGAAACCGGGGCGAGCGGCGATGCGCCGTTTATGGTCACCCCGCCGCTTTTTCGC
CTTAATGGCGGGCAAAAGAACGTACTGCGAATTATCCGTACCGGCGGCAATTTGCCGGAAGATCGCGAGTCGCTGTACTG
GCTGGATATTAAATCGATTCCCAGCAGCAATCCGGACAATAAGCACAATACGCTCATGCTGGCCGTTAAAGCGGAATTTA
AGCTGATTTACCGGCCAAAAGCGTTAACCCAAAAGCCAGAAGAGGTTGCCGATCGGTTAACGTGGTCGCGTCAGGGTCGC
ACGCTCACCGTGAAGAACCCCACGCCCTATTATATGAACTTCGCCACCCTTTCCGTTGGCAGTCAAAAAGTAAAAGCCCC
GCGCTATGTGGCGCCTTTCGGCAACGCGCAGTACACGCTGCCTGCCGCCGCCAGCGGCCCGATCGCCTGGTCTATCATCA
ACGATTTTGGCGGTACTGGCCCCGAACATAAACAAACGCCTTGA

Protein sequence :
MNSLAKAGLLCCLLCGSLAHAAGINIGATRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGASGDAPFMVTPPLFR
LNGGQKNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGR
TLTVKNPTPYYMNFATLSVGSQKVKAPRYVAPFGNAQYTLPAAASGPIAWSIINDFGGTGPEHKQTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 2e-41 43
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 3e-37 41
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 1e-36 41
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 1e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_00215 YP_001586490.1 hypothetical protein VFG0445 Protein 2e-33 41