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Name : SPAB_00214 (SPAB_00214) Accession : YP_001586489.1 Strain : Salmonella enterica SGSC4150; SPB7 Genome accession: NC_010102 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 198189 - 200741 bp Length : 2553 bp Strand : - Note : COG: COG3188 P pilus assembly protein, porin PapC; Psort location: nuclear, score: 23 DNA sequence : GTGCCGATGCGCAAAGGGCAACACAGGGGATTTTATTTATCGCGCTGCGCTGTGTGTATCGCGCTGGGCAGCACGTTCGC ACATGTTGCATGGGCGCGCGACTATTTCAATCCGGCATTTATTGAACACCATGGGCAGGCGAATCGCACAAGCGTCGATC TGTCGACATTTGATAACGACAAAAGCCAACATCCTGGCACCTATTACGTCACTATCATTATCAACAAAACAGAAATCGGC GCGCGAAACGTTGATTTTCAACTCACGACGCTCAGTGACGGTCAACAGGCATTACAGGGCTGTTTACGGCTTCAGGAACT AAAAGATAACGGCGTCAAAACCGACCTTTTTCCAACGCTGGAGAGTGAAAAAAGCTGCGTCGATCTCAGCGCTATCCCCG GTACCAGCCAGCAGTTTGATTTTCAGCAACAGGCATTATCGATAAGCATCCCTCAACTCTACATCGCCAACAACGCGCGC GGCTACGTGCCGCCGGAAAAGTGGCAGGAGGGAATTACCGCGCTAATGCTGAACTACAGTTTCAGCGGCTATAAAGAGTA CGGTTCCAGTGAGGATTCCGACGATGCGGAATCGAAGTATCTCGCTCTCCAGCCGGGTTTTAACCTCGGGCCGTGGCGTT TTCGCAACTACAGTAACTGGAGCGCAAATAACGGCGAGAGCGGTAGCTGGAACAGCGTTTATAACTATTTACAGCGCGAC ATTATCGCGCTGAAAAGCCAGTTCACCGCCGGAGACAGCAATACGCCATCCGACGTGTTCGACAGCGTACCTTTTCGCGG CCTCCAGCTCACCTCTGACGATCAAATGCAGCCCAACAGCCAGCGTGGTTACGCCCCGACGATTCGCGGCATCGCCCGTT CAAACGCGCAGGTTATCGTGCGGCAAAACGGTTATATCGCCTATCAAACTGCCGTTTCGCCGGGCGAATTTGAAATCAAC GATATGTTTCCTACCGGCAGCAACGGCGACTACGACGTGACGGTAAAAGAAGCCGACGGTAGCGAACAGCATTTTATCGT GCCCTACTCTTCGCTGCCGATTCTGCAGCGCACCGGACGGGCAAAATACAGCGTGACCGTGGGTAAATATCGTGATTACG ACAACCACATGCTGGACGACTTCGGCCAGGCGACCCTGCTGTACGGCCTGCCGTGGGGTATCACGCTGTACGGCGGCAGC CAGATTGCCGGCGATAAATACCAGTCCGTCGCCTTCGGCGTCGGGCAAAATATGCAGATGCTGGGGGCCATTTCCCTGGA CGGCATCTGGTCGCACGCCAAATTTGACGATGGCCGCAAAGAAGCCGGGCAATCCTGGCGCGTCCGCTACAGCAAGGGCG TCGTCAGTACGGGCACCACGTTTTCGCTGGCCGGCTATCGTTACGCCAGCGAAAACTACAATTCGCTGAGCGAGGTGATC AACCCGGACGACGATTTTTATGATAACTACGGCAAGCGCCATAATCGTTTCGAAGCTTCAGTCAACCAGCAAATTAGCGA TACGCTCGGTTCCTTAACGCTAAGTTGGGTAAAAGAAGATTACTGGCACAGCGCGCAGCAGATGGAATCTCTGAGCGCCA ACTACAACAATAGCTGGGGCCCGGTGAGCTATACGTTAAGCTACAGCTATAACAAAAACACCTACCAGTACCGATCGGAT AATGACGATGATGATAACGACGACGATCGTTATAACCAGAACGATCGGCTGTTCACGCTGTCGCTGCATGTTCCGTTTAC GGTGTTCGATTCCAGGCTATACGCCAGCTATATGCTGAACACGCGTAAGCACGATGCTACGGTGAACAGCACCACCCTTA GCGGCACCGCGCTGCGTGACAGAAACCTGAACTGGTCGTTACAGCAGAGCCACAGCACACAAGACGGTGATTCCGGCGGG GTAAACGCCAGCTACAAAGGCACTTATGCCAACCTCAACGCCGGTTACAATCAGTCGCCAGATAGCCAACAGGTCAGCTA CGGCATCAGCGGCGGCATTCTGGCGCACGAAAACGGTATTACCCTGAGCCAGCCAATTACCGGCGCGGCGATTTTAATTA AAGCGCCCGGTGCCAGCGGCGTTTCAGTTGAAAACCAGACCGGCGTCGCCACCGACTTCCGGGGTTATACGGTGATCCCC AACGTCACTCCGTATTATCGCTACGATATCTCGCTCGACAGCAGCACGTTTGCCGACAACGTGGATATTCCACTCAACAA CCAGACTGTCTACCCGACGCGTAATGCGGTGGTGCGCGCGGCGTATGACACGCATAAGGGCTATCGCGCGCTGTTAACGC TGACGCGCAGCAATGGCGAGCCCGTGCCCTTTGGCGCGACGGCAAGCGTCGATGGGCAGGATGCGAACCTGGCCAGTATC GTCGGCGATAAAGGCCAGGTCTTCCTCAGCGGCCTGCCGGAAGAGGGCCTGCTCCTGGTGAACTGGGGAAGCGCCTCTTG CCGCGCGGATTACCGTCTGGATATCAGCAAAAATATGAACGGCATAGTGATGGCGAACGCCGTCTGCCAGTGA Protein sequence : MPMRKGQHRGFYLSRCAVCIALGSTFAHVAWARDYFNPAFIEHHGQANRTSVDLSTFDNDKSQHPGTYYVTIIINKTEIG ARNVDFQLTTLSDGQQALQGCLRLQELKDNGVKTDLFPTLESEKSCVDLSAIPGTSQQFDFQQQALSISIPQLYIANNAR GYVPPEKWQEGITALMLNYSFSGYKEYGSSEDSDDAESKYLALQPGFNLGPWRFRNYSNWSANNGESGSWNSVYNYLQRD IIALKSQFTAGDSNTPSDVFDSVPFRGLQLTSDDQMQPNSQRGYAPTIRGIARSNAQVIVRQNGYIAYQTAVSPGEFEIN DMFPTGSNGDYDVTVKEADGSEQHFIVPYSSLPILQRTGRAKYSVTVGKYRDYDNHMLDDFGQATLLYGLPWGITLYGGS QIAGDKYQSVAFGVGQNMQMLGAISLDGIWSHAKFDDGRKEAGQSWRVRYSKGVVSTGTTFSLAGYRYASENYNSLSEVI NPDDDFYDNYGKRHNRFEASVNQQISDTLGSLTLSWVKEDYWHSAQQMESLSANYNNSWGPVSYTLSYSYNKNTYQYRSD NDDDDNDDDRYNQNDRLFTLSLHVPFTVFDSRLYASYMLNTRKHDATVNSTTLSGTALRDRNLNWSLQQSHSTQDGDSGG VNASYKGTYANLNAGYNQSPDSQQVSYGISGGILAHENGITLSQPITGAAILIKAPGASGVSVENQTGVATDFRGYTVIP NVTPYYRYDISLDSSTFADNVDIPLNNQTVYPTRNAVVRAAYDTHKGYRALLTLTRSNGEPVPFGATASVDGQDANLASI VGDKGQVFLSGLPEEGLLLVNWGSASCRADYRLDISKNMNGIVMANAVCQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lpfC | YP_006098365.1 | fimbrial outer membrane usher protein | Not tested | Tn2411 | Protein | 5e-138 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SPAB_00214 | YP_001586489.1 | hypothetical protein | VFG0454 | Protein | 7e-146 | 42 |
| SPAB_00214 | YP_001586489.1 | hypothetical protein | VFG0912 | Protein | 4e-131 | 41 |
