Gene Information

Name : SPAB_01942 (SPAB_01942)
Accession : YP_001588165.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4191
EC number : -
Position : 1648785 - 1650533 bp
Length : 1749 bp
Strand : -
Note : KEGG: stm:STM1386 0. ttrS; sensory histidine kinase K00873; COG: COG0642 Signal transduction histidine kinase; Psort location: endoplasmic reticulum, score: 9

DNA sequence :
GTGTTGGCGGCAGTAGGGCTACTTTGTCATGGCGCGTGGGCAGGGACGTGGAATATCGGTATTTTGGCCATGCGCGGCGA
GGCGTCTACGCGTAGCCACTGGCAACCGTTGGCAAAGACATTAAGCCAACAGCTTCCAGGCGAAACCTTTCACATCCAGC
CGCTGGATCTGCATCAAATGCAGGAGGCTGTTAACCAGGGAACCGTGCAGTTTGTGATAACCAACCCGGCGCAATTTGTC
CAACTGAACAGCCATGCGCCGCTGCGCTGGTTAGCTTCCCTGCGCTCCACGCGCGATGGGAAAGCAGTGAGTAATGTTAT
TGGCAGCGTGATTTTGACCCGACGCGATAGCGGCATCACCACGGCGCATGATCTCATCGGTAAGACCGTCGGCGCGATTG
ATGCTCAGGCGTTTGGCGGCTATTTATTAGGCTATAAAGCGCTCAGCGACGCGGGCTTACGCCCGGAGCGCGATTTTCAT
CTCCGTTTTACCGGATTTCCTGGCGATGCCTTAGTCTATATGCTGCGCGAAAAAGCGGTGCAGGCGGCAATTGTGCCAGT
GTGCCTGTTAGAAAATATGGATCAGGAAGGATTGATTAATAAAAAGGACTTTATCGCGCTGCTTTCCCGACCGACGCCCC
TGCCTTGCTTAACCAGTACGCCGTTATATCCTGACTGGTCGTTCGCGGCGCTACCTGCGGTAAGCGATGCGCTGGCGGAT
CGCGTAACGCGAGCGCTATTCAACGCGCCCGCCGCCGCGTCATTTCACTGGGGCGCGCCTGCGTCCACCAGTCAGGTGGA
AGCCTTGCTGCGTGATGTTCGTCAGCACCCTCAGCAGCGTCGACTGTGGCTGGATGTCAAAAGTTGGTTAATCCAGCACC
AGCTAATGGTCGGCGGCGTGATTCTGGCGTTCCTGTTGCTCACGCTCAATTATATTTGGGTCATGCTGCTGGTGCGTCGA
CGTGGAAAGCAACTGGAACGTAATAGCGTAGTTCTTCATCAGCATGAGCGGGCGCTGGAAACCGCCCGGCAAATGAGCGT
GTTGGGTGAAATGACCTCCGGGTTTGCCCATGAGCTTAATCAGCCGCTTTCCGCGATTCGACATTATGCCCAGGGGTGCC
TGATTCGACTGCGCGCTGCAGATGAACAGCATCCCTTGCTGCCGGCGCTGGAGCAGATTGACCAGCAGGCGCAACGCGGT
GCGGATACTTTGCGTAACCTGCGTCACTGGGTCAGCCAGGCGCAGGGCAACCCGGTGCTAACCGAAGCGTGGAAGGCCAT
AGCCATTCGGGAGGCGATTGATCATGTCTGGCAATTGTTGCGTATGGCGCAACAGTTTCCGACAGTGACTCTGCATACCG
AGGTTAGCGCTGCGCTGCGCGTAACGCTGCCGTCAGTGCTGCTGGAACAGGTGCTGGCGAATATCATTCTTAATGCGGCT
CAGGCGGGCGCCACCCATTTATGGGTCGTTGCTGAACGCACTGAAAACGGCATCAGTATCGCTTTACAGGATAACGCCGG
GGGAATCGATGAGGCGCTATTACGTCAGGCGTTTCAGCCGTTTATGACCACCCGCAAAGAGGGGATGGGCTTAGGGTTGG
CGATTTGCCAGCGGCTGGTGCGGTATGGGCGGGGCGATATCAGTATCAGGAACCAGACCGCGCCGGACGGTCTGTCGGGA
ACGGTGGTCACGATACATTTCTTACATGAAAATGGGGGCAGGGATGGCGACAATTCATCTACTGGATGA

Protein sequence :
MLAAVGLLCHGAWAGTWNIGILAMRGEASTRSHWQPLAKTLSQQLPGETFHIQPLDLHQMQEAVNQGTVQFVITNPAQFV
QLNSHAPLRWLASLRSTRDGKAVSNVIGSVILTRRDSGITTAHDLIGKTVGAIDAQAFGGYLLGYKALSDAGLRPERDFH
LRFTGFPGDALVYMLREKAVQAAIVPVCLLENMDQEGLINKKDFIALLSRPTPLPCLTSTPLYPDWSFAALPAVSDALAD
RVTRALFNAPAAASFHWGAPASTSQVEALLRDVRQHPQQRRLWLDVKSWLIQHQLMVGGVILAFLLLTLNYIWVMLLVRR
RGKQLERNSVVLHQHERALETARQMSVLGEMTSGFAHELNQPLSAIRHYAQGCLIRLRAADEQHPLLPALEQIDQQAQRG
ADTLRNLRHWVSQAQGNPVLTEAWKAIAIREAIDHVWQLLRMAQQFPTVTLHTEVSAALRVTLPSVLLEQVLANIILNAA
QAGATHLWVVAERTENGISIALQDNAGGIDEALLRQAFQPFMTTRKEGMGLGLAICQRLVRYGRGDISIRNQTAPDGLSG
TVVTIHFLHENGGRDGDNSSTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrS CAB37413.1 TtrS Virulence SPI-2 Protein 0.0 99
ttrS NP_805057.1 hypothetical protein Virulence SPI-2 Protein 0.0 99
ttrS YP_216394.1 tetrathionate reductase complex: sensory transduction histidine kinase Virulence SPI-2 Protein 0.0 99
ttrS NP_460351.1 sensory histidine kinase Virulence SPI-2 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_01942 YP_001588165.1 hypothetical protein VFG0487 Protein 0.0 99