Gene Information

Name : SPAB_01941 (SPAB_01941)
Accession : YP_001588164.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 1648190 - 1648810 bp
Length : 621 bp
Strand : -
Note : KEGG: rru:Rru_A1500 2.0e-17 signal transduction histidine kinase (STHK) with CheB and CheR activity K03412:K00575; COG: COG4566 Response regulator; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGGCGACAATTCATCTACTGGATGATGATACGGCGGTCACTAACGCGTGCGCGTTTTTACTGGAAAGTCTGGGATATGA
CGTAAAATGCTGGACGCAGGGGGCGGATTTTTTGGCGCAGGCCAGTCTGTATCAGGCCGGGGTCGTATTACTGGATATGC
GAATGCCGGTACTGGATGGGCAGGGCGTTCATGATGCGTTGCGCCAGTGCGGAAGTACCCTGGCGGTTGTTTTTCTTACC
GGGCATGGCGATGTACCGATGGCCGTGGAGCAGATGAAACGCGGCGCCGTCGATTTTCTGCAAAAACCGGTATCGGTAAA
ACCGCTACAGGCGGCGCTGGAGCGTGCGCTGACGGTTTCATCGGCAGCGGTGGCGCGTCGTGAGATTATACTGTGTTACC
AGCAGTTGACGCCGAAAGAGCGTGAGCTGGCCAGCCTGGTGGCAAAAGGATTTATGAACCGTGAAATTGCGGAAGCGATG
AATATCGCGGTGCGTACCGTAGAGGTGCACCGCGCCAGAGTCATGGAAAAAATGCAGGCCGGTAGCCTGGCGGAACTGAT
TAGGCGTTTCGAAAAAATGGCCTCGCCAGAGACCAGAATACGAACAACGTATGAGTCATGA

Protein sequence :
MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFLT
GHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAM
NIAVRTVEVHRARVMEKMQAGSLAELIRRFEKMASPETRIRTTYES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-94 99
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 3e-94 99
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 3e-94 99
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 3e-94 99
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-94 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_01941 YP_001588164.1 hypothetical protein VFG0488 Protein 7e-95 99