Gene Information

Name : SPAB_01939 (SPAB_01939)
Accession : YP_001588162.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1646903 - 1647784 bp
Length : 882 bp
Strand : +
Note : COG: COG3272 Uncharacterized conserved protein; Psort location: cytoplasmic, score: 23

DNA sequence : 
ATGGATTTTGTCATGAACTCTCTGGCGCCGTGGGTGGCCTACAAACCGATCTGTCCGGAGGTGGCGATCGGCCTGCCCGT
GCCTCGCCCTGCGCTGCGTCTTATCCAGACGACCTGTGGCGACATTCGGATGCGCTATAGCCATGCCCCGCACGATGACG
TCACCGAGCGAATGAATGCCTTTGCCGATCGGTTTCTGCCAACAATAGGCGAACTGGCGGGGTTTATTGTGTGTGCAAAA
TCGCCCAGTTGCGGAATGGAGCGCGTTCGCCTGTATGATGAAAAGGGTAACAGGGGCCGCAAAGCTGGCACGGGGCTGTT
TACCGCCGCGATGATGGACAAATATCCCTGGCTGCCGATAGAGGAAGATGGTCGCCTGCACGATCCGGTACTACGCGAAA
ATTTCATCGCACGTATTTTCGCGCTACATGAATTAAATGCGCTACGCGCGCAGGGCTTGAGTCGTCACAGTTTGCTCGCG
TTTCATAGCCGATACAAACTTCAGCTTCTCGCCCACCACCAGGCCGGCTACCGCGAAATTGGCCCTTTCGTCGCGCGTCT
GCATGAGTGGGACGATCTGGATGCCTTCTTTGTCCGATACAGAGAAAAACTGATGGCTATCCTGCGCCACCCCGCTTCAC
GTAAAAATCACACCAATGTGCTGATGCATATCCAGGGCTATTTTCACCGCGCGTTGAACAGCAGGCAACGCGCGGAATTA
CGCGAGGTGATTCTCGGCTACCGGGCGGGCCGACTACCTATCCTGGCACCGTTAACGCTGCTGAAGCACTATCTGGCGGA
ACATCCGGATGACTATCTACGCAGCCAGAATTATTTTGAGCCGTACCCTGATACATTAGGGCTGCGCTTAGCCATCACCT
GA

Protein sequence : 
MDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAK
SPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA
FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL
REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 6e-140 100
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 6e-140 100
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 6e-140 100
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 5e-140 100
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 1e-139 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_01939 YP_001588162.1 hypothetical protein VFG0490 Protein 3e-140 100