Gene Information

Name : SPAB_01933 (SPAB_01933)
Accession : YP_001588156.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1641513 - 1641896 bp
Length : 384 bp
Strand : -
Note : COG: NOG20795 non supervised orthologous group; Psort location: cytoplasmic, score: 23

DNA sequence : 
ATGCTGGCAGTTTTAAAAGGCATTCCATTAATTCAGGATATCAAGGCCGAAGGTAATAGCCGATCCTGGATAATGACTAT
TGATGGGCATCCTGCCAGAGGAGAAATTTTCTCAGAAGCATTTTCTATTTCTTTGTTCTTAAATGACCTGGAAAGCTTAC
CTAAGCCTTGTCTTGCCTATGTGACACTACTGCTTGCAGCACACCCGGACGTCCATGATTATGCTATACAGCTCACAGCG
GATGGGGGATGGTTAAACGGTTATTATACCACAAGTAGTAGCTCTGAGCTTATTGCTATTGAGATAGAAAAACACCTGGC
TTTAACTTGCATTTTAAAAAATGTAATACGCAATCACCATAAACTTTATTCGGGTGGGGTATAA

Protein sequence : 
MLAVLKGIPLIQDIKAEGNSRSWIMTIDGHPARGEIFSEAFSISLFLNDLESLPKPCLAYVTLLLAAHPDVHDYAIQLTA
DGGWLNGYYTTSSSSELIAIEIEKHLALTCILKNVIRNHHKLYSGGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spiC AEZ06295.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 1e-49 100
spiC AEZ06296.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 1e-49 100
spiC AEZ06300.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 3e-49 99
spiC AEZ06298.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 2e-49 99
spiC AEZ06299.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 2e-49 99
spiC NP_456135.1 putative pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 3e-49 99
spiC NP_805064.1 pathogenicity island secreted effector protein Virulence SPI-2 Protein 3e-49 99
spiC AEZ06297.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 3e-49 99
spiC AAC44300.1 SpiC Virulence SPI-2 Protein 2e-49 99
ssaB YP_216401.1 secretion system apparatus protein SsaB Virulence SPI-2 Protein 3e-49 99
ssaB NP_460358.1 secreted effector protein Virulence SPI-2 Protein 2e-49 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_01933 YP_001588156.1 hypothetical protein VFG0494 Protein 6e-50 99