Gene Information

Name : SPAB_01927 (SPAB_01927)
Accession : YP_001588150.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1637389 - 1637979 bp
Length : 591 bp
Strand : -
Note : COG: NOG20796 non supervised orthologous group; Psort location: extracellular, including cell wall, score: 9

DNA sequence : 
ATGTCTTCAGGAAACATCTTATGGGGAAGTCAAAACCCTATTGTGTTTAAAAATAGCTTCGGCGTTAGCAACACTGATAC
CGGGGGTCAGGATGACTTATCCCAGCAAAATCCGTTTGCCGAAGGGTATGGTGTTTTGCTTATTCTCCTTATGGTTATTC
AGGCTATTGCAAACGATAAATTTATTGAAGTCCAGAAGAACGCTGAACGTGCCAGAAATACCCAGGAAAAGTCAAATGAG
ATGGATGAGGTGATTGCTAAAGCAGCCAAGGGAGATGCTAAAACCAAAGAGGAGGTGCCTGATGACGTAATTAAATACAT
GCGCGATCACGGTATTCTCATCGATGGTCTGACCATTGATGAATATATGGCTAAATATGGCGATCATGGGAAGCTGGATA
AAGGTGGCCTACAGGCGATCAAAGCGGCTTTGGATAATGACGCCAACCGGAATACCGATCTTATGAGTCAGGGGCAGATA
ACAATTCAAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACCCAACTGACAGGGCTTATCAGTAAGTGGGGGGAAATTTC
CAGTATGATAGCGCAGAAAACGTACTCATGA

Protein sequence : 
MSSGNILWGSQNPIVFKNSFGVSNTDTGGQDDLSQQNPFAEGYGVLLILLMVIQAIANDKFIEVQKNAERARNTQEKSNE
MDEVIAKAAKGDAKTKEEVPDDVIKYMRDHGILIDGLTIDEYMAKYGDHGKLDKGGLQAIKAALDNDANRNTDLMSQGQI
TIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseB YP_216406.1 secretion system effector protein SseB Virulence SPI-2 Protein 3e-86 99
sseB NP_456130.1 putative pathogenicity island effector effector protein Virulence SPI-2 Protein 1e-85 97
sseB NP_805069.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-85 97
sseB NP_460363.1 translocation machinery component Virulence SPI-2 Protein 1e-85 97
sseB AAC28879.1 putative secreted protein Virulence SPI-2 Protein 8e-86 97
sseB CAA12185.1 SseB Virulence SPI-2 Protein 8e-86 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_01927 YP_001588150.1 hypothetical protein VFG0499 Protein 3e-86 97