Gene Information

Name : SPAB_01923 (SPAB_01923)
Accession : YP_001588146.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1634440 - 1634853 bp
Length : 414 bp
Strand : -
Note : COG: NOG20797 non supervised orthologous group; Psort location: cytoplasmic, score: 23

DNA sequence :
GTGCAAGAAATAGAGCAATGGTTGCGTCGGCATCAGGTGTTTACTGAGCCTGCATATTTAGGGGAGACCGCCATATTACT
TGGGCAGCAGTTTATATTATCGCCTTACCTGGTGATCTATCGTATTGAGGCAAAAGAAATGATTATTTGTGAGTTCAGGC
GCCTGACGCCCGGGCAACCTCGACCACAGCAATTGTTTCACTTACTGGGACTTTTACGCGGGATATTTGTGCATCACCCG
CAGTTAACATGTTTAAAGATGTTGATAATCACCGACGTTCTGGATGAAAAAAAAGCCATGCTACGCAGGAAATTATTGCG
CATCCTGACAGTAATGGGAGCGACCTTTACACAGCTTGATGGCGATAACTGGACAGTTTTATCCGCCGAGCATCTTATCC
AGCGACGTTTTTAA

Protein sequence :
MQEIEQWLRRHQVFTEPAYLGETAILLGQQFILSPYLVIYRIEAKEMIICEFRRLTPGQPRPQQLFHLLGLLRGIFVHHP
QLTCLKMLIITDVLDEKKAMLRRKLLRILTVMGATFTQLDGDNWTVLSAEHLIQRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseE YP_216410.1 secretion system effector SseE Virulence SPI-2 Protein 6e-62 99
sseE NP_460367.1 secreted effector protein Virulence SPI-2 Protein 6e-62 99
sseE AAC28883.1 SseE Virulence SPI-2 Protein 4e-62 99
sseE CAA12189.1 SseE Virulence SPI-2 Protein 4e-62 99
sseE NP_456126.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 8e-62 99
sseE NP_805073.1 pathogenicity island effector protein Virulence SPI-2 Protein 8e-62 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_01923 YP_001588146.1 hypothetical protein VFG0503 Protein 2e-62 99