Gene Information

Name : SPAB_01921 (SPAB_01921)
Accession : YP_001588144.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1633156 - 1633938 bp
Length : 783 bp
Strand : -
Note : COG: NOG26742 non supervised orthologous group; Psort location: plasma membrane, score: 23

DNA sequence : 
ATGAAAATTCATATTCCGTCAGCGGCAAGTAATATAGTCGATGGTAATAGTCCTCCTTCCGATATACAAGCGAAGGAGGC
ATCGTTTCCTCCCCCTGAAATTCCAGCCCCTGGCACCCCCGCAGCCCCAGTGCTGCTTACGCCTGAACAAATAAGGCAGC
AGAAGGATTATGCGATACATTTTATGCAATACACTATTCGTGCGCTGGGTGCGACAGTCGTGTTTGGATTATCGGTTGCT
GCAGCGGTAATTTCTGGCGGGGCAGGATTACCCATTGCTATTCTTGCGGGGGCGGCGCTCGTGATTGCTATTGGGGATGC
TTGCTGTGCGTATCATAATTATCAATTGATATGTCAGCAAAAGGAGCCGTTACAAACCGCCAGTGATAGCGTTGCTCTTG
TGGTCAGTGCGCTGGCCTTAAAATGTGGGGCAAGTCTTAACTGCGCTAACACCCTTGCTAATTGTCTTTCTTTATTAATA
CGTTCAGGAATCGCTATTTCTTCGTTGGTTATACAACTACAGTTTCCACTGCCCGCCGCTGAAAATATAGCGGCCTCTTT
GGACATGGGGAGTGTAATTACCTCCGTTAGCCTGACGGCGATAGGTGCGGTACTGGATTATTGCCTTGCCCGCCCCTCTG
GCGACGATCAGGAAAATTCTGTTGATGAACTTTATGCCGATCCCAGTGCGTTATTGGCGGAACAAATGGCATCGCTCTGC
CAATCTGCTACTACACCTGCATTAATGGACAGTTCTGGTCATACATCTCGGGGAGAACCATGA

Protein sequence : 
MKIHIPSAASNIVDGNSPPSDIQAKEASFPPPEIPAPGTPAAPVLLTPEQIRQQKDYAIHFMQYTIRALGATVVFGLSVA
AAVISGGAGLPIAILAGAALVIAIGDACCAYHNYQLICQQKEPLQTASDSVALVVSALALKCGASLNCANTLANCLSLLI
RSGIAISSLVIQLQFPLPAAENIAASLDMGSVITSVSLTAIGAVLDYCLARPSGDDQENSVDELYADPSALLAEQMASLC
QSATTPALMDSSGHTSRGEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseF YP_216412.1 secretion system effector protein SseF Virulence SPI-2 Protein 4e-90 99
sseF NP_460369.1 secreted effector protein Virulence SPI-2 Protein 1e-86 97
sseF AAC28885.1 SseF Virulence SPI-2 Protein 1e-86 97
sseF NP_805075.1 pathogenicity island effector protein Virulence SPI-2 Protein 2e-86 96
sseF CAA12191.1 SseF Virulence SPI-2 Protein 2e-85 96
sseF NP_456124.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 2e-86 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_01921 YP_001588144.1 hypothetical protein VFG0505 Protein 6e-87 97