Gene Information

Name : SPAB_01916 (SPAB_01916)
Accession : YP_001588139.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4669
EC number : -
Position : 1630887 - 1631576 bp
Length : 690 bp
Strand : -
Note : COG: COG4669 Type III secretory pathway, lipoprotein EscJ; Psort location: cytoplasmic, score: 23

DNA sequence :
GTGGATCTTTATCGCTCATTGCCAGAAGATGAAGCGAATCAAATGCTGGCATTACTTATGCAGCATCATATTGATGCGGA
AAAAAAACAGGAAGAGGATGGTGTAACCTTACGTGTCGAGCAGTCGCAGTTTATTAATGCGGTTGAGCTACTTAGACTTA
ACGGTTATCCGCATAGGCAGTTTACAACGGCGGATAAGATGTTTCCGGCTAATCAGTTAGTGGTATCACCCCAGGAAGAA
CAGCAGAAGATTAATTTTTTAAAAGAACAAAGAATTGAAGGAATGCTGAGTCAGATGGAGGGCGTGATTAATGCAAAAGT
GACCATTGCGCTACCGACTTATGATGAGGGAAGTAACGCTTCTCCGAGCTCAGTTGCCGTATTTATAAAATATTCACCTC
AGGTCAATATGGAGGCCTTTCGGGTAAAAATTAAAGATTTAATAGAGATGTCAATCCCTGGGTTGCAATACAGTAAGATT
AGTATCTTGATGCAGCCTGCTGAATTCAGAATGGTACCTGATGTACCCGCGAGACAAACATTCTGGATTATGGACGTGAT
CAACGCCAATAAAGGGAAGGTGGAGAAGTGGTTGATGAAATACCCTTATCAGTTGATGTTATCGTTGACAGGACTGTTAT
TAGGAGTGGGCATCCTGATCGGCTATTTTTGCCTGAGACGCCGTTTTTGA

Protein sequence :
MDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEE
QQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVEKWLMKYPYQLMLSLTGLLLGVGILIGYFCLRRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaJ CAA70532.1 secretion system apparatus Virulence SPI-2 Protein 3e-94 99
ssaJ NP_460374.1 needle complex inner membrane lipoprotein Virulence SPI-2 Protein 5e-94 99
ssaJ NP_456119.1 putative pathogenicity island lipoprotein Virulence SPI-2 Protein 7e-95 99
ssaJ NP_805080.1 pathogenicity island lipoprotein Virulence SPI-2 Protein 7e-95 99
ssaJ YP_216417.1 secretion system apparatus protein SsaJ Virulence SPI-2 Protein 2e-95 99
ssaJ CAA12196.1 SsaJ Virulence SPI-2 Protein 1e-74 99
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 8e-47 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_01916 YP_001588139.1 hypothetical protein VFG0510 Protein 2e-94 99