Gene Information

Name : SPAB_01904 (SPAB_01904)
Accession : YP_001588127.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 1621479 - 1622126 bp
Length : 648 bp
Strand : -
Note : COG: COG4791 Type III secretory pathway, component EscT; Psort location: endoplasmic reticulum, score: 9

DNA sequence : 
ATGTCACTTACCTTTCCCATATTACCAATCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGCTGGTT
AGGGTTAGTCACCGGAGAGGTGATTATTGGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGG
CGGGGTTTCTGCTTGATACTTTACGTGGCGCGACAATGGGTACGATATTCAATTCTACAATAGAAGCTGAAACCTCACTT
TTTGGCTTGCTTTTCAGCCAGTTCTTGTGTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAATATTCTGTA
TGAGTCATATCAATATTTACCACCAGGGCGTACTTTATTATTTGACCGGCAATTTTTAAAATATATCCAGGCAGAGTGGA
GAACGCTTTATCAATTATGTATCAGCTTCTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTT
TTAAATCGGTCGGCACAACAATTGAATGTGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTGGTTCTACTGACGCTCCT
GATCTCATTCCCTTATGCTCTTCATCACTATTTGGTTGAAAGCGATAAATTTTATATTTATCTAAAAGACTGGTTTCCAT
CTGTATGA

Protein sequence : 
MSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTIEAETSL
FGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPGRTLLFDRQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGL
LNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHHYLVESDKFYIYLKDWFPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 2e-90 99
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 2e-90 99
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 1e-90 99
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 2e-91 99
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 2e-91 99
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 4e-43 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_01904 YP_001588127.1 hypothetical protein VFG0521 Protein 8e-91 99