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Name : SPAB_00178 (SPAB_00178) Accession : YP_001586453.1 Strain : Salmonella enterica SGSC4150; SPB7 Genome accession: NC_010102 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 160421 - 161806 bp Length : 1386 bp Strand : - Note : KEGG: pen:PSEEN2333 1.2e-80 xcpR-2; type II secretion pathway protein E K01509; COG: COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Psort location: cytoplasmic, score: 23 DNA sequence : ATGAAAGACGCTCAGCTCAACACATTGTGTCAACGTCATCAGGCTGTACTGATCAATAGCGCCAGCAACAGTATCACTGT TGCGGTGGTCGACGCGCCCTCTCATGCGTTACTGGACGCTCTGCATTTCGCCACGCAAAAACAGATTGATATTGTGTGCT GGACTCGCCAGCAAATGGAAAATCATCGGCATAAGCCGGATCAGGCTCCCTCGGCAAACGCCGCGAAAGGCGGAGAAACC GCGGCCCAGCTTCTCAATCAGACATTACGCTCGGCGATGGCGAAACGCGCCTCTGATATCCATCTCGAACCAGGCGCCAG CCGCTACCGGATAAGACTCCGCATCGACGGCGTTCTTCATATTCTGCAGGACATCGCCAAAGAGACGGGGCTTGCGCTGA CGGCCAGATTGAAAGTCCTGGGAAATTTGGACATCGCTGAACATCGGCTGCCGCAGGACGGGCAATTTACCGTTGACCTG GCGGGCGACAGCATCTCTTTTCGTATCGCCACGCTTCCCTGTAAAGAAGGCGAAAAAGTCGTCTTACGGTTGTTGCATCA GGTTGAACAAACGCTGGATCTGGACACGCTGGGCATGTACGGGGCACAACTTACCGCTTTTAGACAAGCCCTACAGCAAC CTCAGGGGCTGGTACTGGTGACTGGCCCCACCGGTAGCGGAAAAACAGTCACGCTATACAGCGCGCTACAAACCCGGAAT ATGCCGGGTATCAACCTCTGTAGCGTTGAGGATCCGATAGAAATTCCACTGGATGGGATTAACCAAACGCAGATCCATCC CCGCGCCGGGCTCACCTTTCAAAATGTGCTGCGCGCGCTTTTACGCCAGGATCCTGACATCATCATGGTAGGTGAAATTC GTGACGGCGACACCGCAGAAATCGCCATTAAGGCGGCACAAACGGGCCATCTGGTACTTTCCACGCTCCATACGAACTCC ACCAGCGAAACCCTGATACGTTTACAACAAATGGGCGTAGCACGCTGGATGATCTCATCGGCGCTTACGCTGGTGGTAGC GCAACGCCTGGTAAGGAAGCTTTGCCCGCACTGCAAACAGCGCCTGAGCGATCCCGTGGTGCTATCGCCCAATCTTTGGC CCAGCGCGCTACCGCGCTGGCAGGCAAGCGGCTGTCAGCATTGCTACCACGGCTTTTATGGCCGAACCGCGTTATTCGAA GTGTTAACCGTTACCCCGACATTACGTCAGTTAATTGCGAGCGGCGCATCGGCACAAGCACTGGAAGCCCACCTCCAACA GACCGGTACAGGGACGCTTTTTGAAAATGGCTGTCGCGCCGTTGAGCAAGGCATGACGTCCTTTGAAGAGATACTGCGCG TTCTGGGAATGCCCCATGAGCGTTAA Protein sequence : MKDAQLNTLCQRHQAVLINSASNSITVAVVDAPSHALLDALHFATQKQIDIVCWTRQQMENHRHKPDQAPSANAAKGGET AAQLLNQTLRSAMAKRASDIHLEPGASRYRIRLRIDGVLHILQDIAKETGLALTARLKVLGNLDIAEHRLPQDGQFTVDL AGDSISFRIATLPCKEGEKVVLRLLHQVEQTLDLDTLGMYGAQLTAFRQALQQPQGLVLVTGPTGSGKTVTLYSALQTRN MPGINLCSVEDPIEIPLDGINQTQIHPRAGLTFQNVLRALLRQDPDIIMVGEIRDGDTAEIAIKAAQTGHLVLSTLHTNS TSETLIRLQQMGVARWMISSALTLVVAQRLVRKLCPHCKQRLSDPVVLSPNLWPSALPRWQASGCQHCYHGFYGRTALFE VLTVTPTLRQLIASGASAQALEAHLQQTGTGTLFENGCRAVEQGMTSFEEILRVLGMPHER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-69 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-70 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SPAB_00178 | YP_001586453.1 | hypothetical protein | VFG2048 | Protein | 2e-71 | 47 |
| SPAB_00178 | YP_001586453.1 | hypothetical protein | VFG2426 | Protein | 1e-69 | 45 |
| SPAB_00178 | YP_001586453.1 | hypothetical protein | VFG0182 | Protein | 7e-73 | 44 |
| SPAB_00178 | YP_001586453.1 | hypothetical protein | VFG1876 | Protein | 7e-75 | 44 |
| SPAB_00178 | YP_001586453.1 | hypothetical protein | VFG0112 | Protein | 6e-77 | 44 |
| SPAB_00178 | YP_001586453.1 | hypothetical protein | VFG0233 | Protein | 9e-68 | 43 |
