Gene Information

Name : Nmar_1713 (Nmar_1713)
Accession : YP_001583047.1
Strain : Nitrosopumilus maritimus SCM1
Genome accession: NC_010085
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1570929 - 1571552 bp
Length : 624 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA1668 lipoprotein releasing system, ATP-binding protein

DNA sequence : 
TTGTCAGTTGAACAAGGTGAAATTGTTCTAATTGTTGGAAGTTCTGGTTCAGGAAAATCTACGCTACTTAACATGATTGG
TTTACTTGACCGCCCGACAAGTGGTAAGATCTACATTGATGGAACTGATACAACAACTCTTGATGATGATAAGATCTCTT
CATTTAGAAATAAAAAACTGGGATTCATCTTCCAATTTTCAAATCTGCTTACTGACTTGACAGTCCTAGAAAATGTCTTG
TTGCCACGACAAATTGCAGGAACAAATGAAACTGCTGAAAAAGATGCAAGAGATTTGCTAAAAGCAGTTGGATTAGAAGA
TCAAATGAATAAACGTGCAAATAAAATTTCAGGTGGACAAGCTCAAAGAGCAGCTATTGCAAGAGGATTAATCAATAAAC
CATCAATTGTTTTAGCAGATGAGCCTACAGGAAATCTAGACTCTGTTACATCTGAAACTATAGTTCAATTGATGAAAGAC
ATGGCAAAAAAACTTAATCAGACATTTGTTATTGTCACACATGATCGTCAACACTTTGGTGATGTAGACAAAGTAATCAC
AATAAAAGATGGTAAAGCCTTTGAAGGAGATATGCCGTCTGAAATGGAGGTTTTAGTAAAATGA

Protein sequence : 
MSVEQGEIVLIVGSSGSGKSTLLNMIGLLDRPTSGKIYIDGTDTTTLDDDKISSFRNKKLGFIFQFSNLLTDLTVLENVL
LPRQIAGTNETAEKDARDLLKAVGLEDQMNKRANKISGGQAQRAAIARGLINKPSIVLADEPTGNLDSVTSETIVQLMKD
MAKKLNQTFVIVTHDRQHFGDVDKVITIKDGKAFEGDMPSEMEVLVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-18 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-19 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-19 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-19 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nmar_1713 YP_001583047.1 ABC transporter CP001581.1.gene798.p Protein 2e-28 47
Nmar_1713 YP_001583047.1 ABC transporter CP001581.1.gene598.p Protein 9e-28 46
Nmar_1713 YP_001583047.1 ABC transporter NC_008702.1.4606598. Protein 6e-16 46
Nmar_1713 YP_001583047.1 ABC transporter NC_012469.1.7686878. Protein 1e-23 44