Gene Information

Name : Bmul_0062 (Bmul_0062)
Accession : YP_001578254.1
Strain :
Genome accession: NC_010084
Putative virulence/resistance : Virulence
Product : general secretory pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 63940 - 65436 bp
Length : 1497 bp
Strand : -
Note : KEGG: bvi:Bcep1808_0069 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase

DNA sequence :
GTGAGCGACCTGCTGTCCTCCGCCCACGACGGCGCACCCGGCGAACGGCAGCCGCCCTCGCCGCTCGCCGCGCGGCTGCT
GCCGTACGGCTTCGCGAAGAACGGCCAGGTGCTGATCGCGCACCAGCTCGACGACACGCTCGAGGTGTGGATCAGCGATC
GCACGAACGACGCCGCGCTGGCCGAGATCGCACGCAATTTCGGCTCGATCGTCGTGCAGCGTGTGCCGGCCGACGAGCTC
GCGCAGGCGATCAACCACGCGTATGCGCGGCAGGACGGCAGCGCTGCGCAGATCGTCGGCGAGGTCGAAGGCGAAGTCGA
TCTGTCGCGGCTGATGCAGGACATCCCGGAAGTCGAGGATCTGCTCGAATCGGAGGACGACGCGCCGATCATCCGGATGA
TCAACGCGCTGCTGACGCAGGCCGCGCGCGAACAGGCGTCGGACATCCATATCGAACCGTTCGAGAATGCATCGGTCGTG
CGCTTTCGCGTCGACGGCACGCTGCGCGACGTCGTGCGGCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGCATCAA
GATCATGGCGCAGCTCGACATCGCGGAAAAGCGTCTGCCGCAGGACGGCCGCATCACGCTGCGCGTCGGCGGCCGACCGG
TCGACGTGCGCGTGTCGACGCTGCCGACCGGCCACGGCGAACGCGCGGTGCTGCGTCTGCTCGAGAAGGACGCGCAGCGG
CTGAACCTCGAAGCGCTCGGGATGGGCCGCGACACGCTCGTGCAGTTCGACAAGCTGATCTCGCGTCCGCACGGCATCGT
GCTCGTCACCGGGCCTACGGGCTCCGGGAAGACGACGACGCTGTACGCGTCGATGTCGCGGCTCGAAACCGCGACGACCA
ATATCATGACCGTCGAGGATCCGATCGAATACGACCTGTCGGGCATCGGCCAGACGCAGGTCAACGAGCGGATCGGGATG
ACCTTCGCGCGCGCGCTGCGCTCGATCCTGCGTCAGGACCCGGACGTGATCATGATCGGCGAAATCCGCGACCTCGAAAC
CGCACAGATCGCGGTGCAGGCCTCGCTCACCGGCCACCTCGTGCTCGCGACGCTGCACACGAACGATGCGGCGTCGGCCG
TCACGCGTCTGACCGACATGGGCGTCGAGCCGTATCTGCTCGCGTCGTCGCTGCTCGGCGTGCTCGCGCAGCGGCTCGTG
CGCCAGCTTTGCCCCGTCTGCAAGGAAGAGCGGCACGAGGACGGCCGCAGCGTGTGGCATCCGGTGGGCTGCGACAAGTG
CGGGCATTCGGGCTACACGGGCCGGCGCGGCGTGTACGAGCTGCTGATCGTCGACGATGCGATCCGCACGCTGATTCACC
GCAACGCGGCCGACGCGGAGATTCTCGCGGCCGGCCGCGCGCAGGGCATGCGCACGCTGCGCGACGACGCGGAGCGCTGG
CTCGCGGCCGGTGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCATAG

Protein sequence :
MSDLLSSAHDGAPGERQPPSPLAARLLPYGFAKNGQVLIAHQLDDTLEVWISDRTNDAALAEIARNFGSIVVQRVPADEL
AQAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVV
RFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQR
LNLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIGM
TFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLV
RQLCPVCKEERHEDGRSVWHPVGCDKCGHSGYTGRRGVYELLIVDDAIRTLIHRNAADAEILAAGRAQGMRTLRDDAERW
LAAGATSLEEVLRVTGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 9e-117 53
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 7e-117 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bmul_0062 YP_001578254.1 general secretory pathway protein E VFG0182 Protein 3e-125 55
Bmul_0062 YP_001578254.1 general secretory pathway protein E VFG1876 Protein 1e-118 52
Bmul_0062 YP_001578254.1 general secretory pathway protein E VFG2048 Protein 6e-117 52
Bmul_0062 YP_001578254.1 general secretory pathway protein E VFG0233 Protein 1e-86 49
Bmul_0062 YP_001578254.1 general secretory pathway protein E VFG2426 Protein 1e-76 48
Bmul_0062 YP_001578254.1 general secretory pathway protein E VFG0112 Protein 6e-81 43