Gene Information

Name : lhv_1052 (lhv_1052)
Accession : YP_001577404.1
Strain : Lactobacillus helveticus DPC 4571
Genome accession: NC_010080
Putative virulence/resistance : Unknown
Product : integrase/recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1031814 - 1032719 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence :
ATGGAGAAGAATAAGTTACAAGATCAAATTGATGATTATTTACGATATAGCCAAATTGAACGTGGTTTAAGCAGCAATAC
GATTACTGCCTACCGTCAAGATTTGGAAGAATACTTAGCTTTTGTAAAAAAAGAAGGCATGGATTCGTGGCCCACTGAAG
CTAGTGATGTAGATGCTTTTTTGGCAAGACAGTACGATTTAAATAAAGCCACAAGTTCAATCAGTCGTCTTATTTCTAGC
ATGCGTAAATTTTATCAATGGCTTGCGCGTCAAAATATTCAAAAATTAAATCCAATGCTTGAGATTGATTTACCTAAAAA
AGAACGCCGTCTTCCTGTAGCTTTGAATCAAAAAGAAATTAATGATTTACTTGCTCAACCTGATATTAAACGGAAATTAG
GCTTAAGAGATCGAGCAATTTTAGAGACTTTATATGCTACAGGTATGCGTGTAAGTGAATTGATTAATTTAGAATTACAA
GACCTGCATGAAGATTTGGGTTTAGTTAGAGTACTGGGAAAGGGCTCTAAGGAGCGCTTAATACCAATTAGCTCAGTAGC
TTTGCATTGGATAAAACAATATCAAAAAGAAGTGCGTGATCCGCTAATTTTGAAAGCTGGACAAAATGATGAGCATATTT
TCTTGAATAGCAGGGCCAAGCAGCTTACGCGTCAGGCAATTTGGCAAATGATAAAAAAGTATTGTCAATCTGCCGGTATT
ACCAAAGATGTTACACCTCATACATTACGTCACACCTTTGCTACACATCTGCTTGAAAATGGTGCGGACTTACGAGTCGT
TCAAGAAATTTTAGGACACTCAGATATAAGCACTACTCAAATTTATACTAATTTGTCTCAAAAACATATTTTACAGGTAT
ATCAAAAGACGCATCCTCGTCTTTAG

Protein sequence :
MEKNKLQDQIDDYLRYSQIERGLSSNTITAYRQDLEEYLAFVKKEGMDSWPTEASDVDAFLARQYDLNKATSSISRLISS
MRKFYQWLARQNIQKLNPMLEIDLPKKERRLPVALNQKEINDLLAQPDIKRKLGLRDRAILETLYATGMRVSELINLELQ
DLHEDLGLVRVLGKGSKERLIPISSVALHWIKQYQKEVRDPLILKAGQNDEHIFLNSRAKQLTRQAIWQMIKKYCQSAGI
TKDVTPHTLRHTFATHLLENGADLRVVQEILGHSDISTTQIYTNLSQKHILQVYQKTHPRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-51 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-51 42