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Name : secA (lhv_0720) Accession : YP_001577153.1 Strain : Lactobacillus helveticus DPC 4571 Genome accession: NC_010080 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 701073 - 703472 bp Length : 2400 bp Strand : + Note : functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap DNA sequence : ATGCTAAATATTTTAAAGAAATTATATAACGACGATAAAAGAGAACTTAAGAAATTCGAAAAATATGCCAACAAAGTAGA AGGCTATGCTGATGAAATGAGCAAGCTTACCGATGAACAATTGCAAGCTAAGACTCCAGAGTTTCGTGAACGGATCAAGA AGGGTGAAAGCTTAGATGATCTTTTGCCAGAAGCATTTGCTGTAGCACGTGAAGGTGCTAAGCGTGTTCTTGGTCTTTAC CCATTCCACGTTCAAATTTTAGGTGGTATCGCACTTCACTTCGGTAACATTGCCGAAATGATGACGGGTGAAGGTAAGAC TTTGACAGCTACTATGCCTGTTTATTTGAATGCCCTTGAGGGGAAAGGCGTTCACGTTGTTACTGTTAACGAATATCTTT CTAGTCGTGACGAAGAAGAAATGGGTCAACTCTATAAGTGGCTTGGTTTGACTGTAGGCTTGAACTTGAATTCAATGTCC CCAGATGAAAAGCGCGAAGCTTATAATTGTGATGTTACTTACTCAACTAACTCAGAATTAGGCTTTGACTATTTGCGTGA CAACATGGTTGTTTATAAAGAACAAATGGTTCAACGTCCGCTTAATTACGCTATCATCGACGAAGTTGACTCAATTTTGA TTGATGAAGCTAGAACGCCATTGATTATTTCTGGTGAAGCTGAACAAGCAAACAGTGACTACATTCGTGCAGACCGCTTT GTTAAGAATTTATCAGAAGATAAAAGCGATGACGATGTGGATGATGACGAAGATTATGGCGATTACAAGATCGATTGGCC AACTAAGACTATTTCTCTTACCAGAACTGGTATTGAGAAGGCATGTAAACACTTTGGTTTAAGAAACTTATATGATGTTG AAAACCAAAAGCTGGTTCACCATATCGATCAAGCTCTTCGTGCTAACTACATCATGCTTAAGGACATTGACTACGTTGTT CAAGATGGTGAAGTTTTGATCGTTGACTCATTCACTGGTCGTGTAATGGAAGGACGGCGTTATTCAGACGGATTGCACCA AGCCATTGAAGCTAAGGAAGGCGTTAAGATTCAAGAAGAATCTAAGACTCAAGCTACAATTACTTACCAGAATTTCTTCA GAATGTACAAGAAGCTATCTGGTATGACTGGTACTGCTAAGACTGAAGAAGAAGAATTCCGTGAAATCTACAACATGCAG GTAATCACAATTCCAACTAACCGTCCAATTGCCAGAAAAGATATGCCTGATATTTTGTACCCAACTTTGGATTCAAAATT CCATGCTGTAGTTGAAGAAATTAAGAAGCGCCATGCTAATGGTCAACCTGTTTTGGTTGGTACTGTTGCCATTGAAAGTT CAGAAAGACTTAGCCACTTGCTTGATGAAGCAGGAATTCCACATGCTGTTTTGAACGCTAAGAATCACGCTAAGGAAGCT CAAATCATTATGAATGCCGGTCAACGTGGAGCTGTTACTATTGCTACTAACATGGCTGGTCGTGGTACTGATATTAAGCT TGGGCCTGGTGTGAAAGAACTTGGTGGTTTAGCCGTAATTGGTACTGAACGACATGAATCACGTCGTATTGATAACCAGC TTCGTGGTCGTTCTGGTCGTCAGGGTGACCCTGGTTATACTCGTTTCTATTTGTCACTTGAAGATGACTTGATGAAGCGT TTCGGTGGAGATCGTGTTAAGGATTTCTTAGATCGTTTATCAGATAATGATGATGATAAAGTGATTGAAAGTCGTTTGAT TACCCGTCAAGTGGAATCAGCTCAAAAACGTGTTGAAGGTAACAACTACGATATTCGTAAACAGACTTTGCAATACGATG ATGTTATGCGTATTCAACGTGAAATTATTTACGGTGAAAGAATGCAAGTAATTGATGCTGACAAGTCATTGAAGAATGTT TTGATTCCAATGATTCACCGTACAATTGATAGTCAAGTTGATATGTTTACTCAAGGCGATAGAAGTGAATGGCGTCTTGA TTCATTGCGCGACTTTATTTCTTCAAGTTTGACTTCTGAACAAGTTACAGACTCAATTGATTTTAAGACTATCAGTGTTG AAGACTTAAAGAAAAAGTTATACGACATTGTAGAAAAGAACTTCGAAGATAAAGAAAAAGCATTGGGCGATCCTAGTCAA ATGCTTGAATTCGAAAAGGTTGTTATCTTGCGTGTTGTTGATGATCGCTGGACTGATCATATTGATGCAATGGATCAATT GCGTCAATCAATTGGTCTTCGTGGTTATGGACAGCTTAATCCGCTTGTTGAATATCAAGATTCTGGTTACAGAATGTTTG AAGAAATGATTTCAAATATTGAATTTGATGTAACTCGTTTGTTCATGAAGGCTGAAATTAGACAAAATATTAGTCGTTAA Protein sequence : MLNILKKLYNDDKRELKKFEKYANKVEGYADEMSKLTDEQLQAKTPEFRERIKKGESLDDLLPEAFAVAREGAKRVLGLY PFHVQILGGIALHFGNIAEMMTGEGKTLTATMPVYLNALEGKGVHVVTVNEYLSSRDEEEMGQLYKWLGLTVGLNLNSMS PDEKREAYNCDVTYSTNSELGFDYLRDNMVVYKEQMVQRPLNYAIIDEVDSILIDEARTPLIISGEAEQANSDYIRADRF VKNLSEDKSDDDVDDDEDYGDYKIDWPTKTISLTRTGIEKACKHFGLRNLYDVENQKLVHHIDQALRANYIMLKDIDYVV QDGEVLIVDSFTGRVMEGRRYSDGLHQAIEAKEGVKIQEESKTQATITYQNFFRMYKKLSGMTGTAKTEEEEFREIYNMQ VITIPTNRPIARKDMPDILYPTLDSKFHAVVEEIKKRHANGQPVLVGTVAIESSERLSHLLDEAGIPHAVLNAKNHAKEA QIIMNAGQRGAVTIATNMAGRGTDIKLGPGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGYTRFYLSLEDDLMKR FGGDRVKDFLDRLSDNDDDKVIESRLITRQVESAQKRVEGNNYDIRKQTLQYDDVMRIQREIIYGERMQVIDADKSLKNV LIPMIHRTIDSQVDMFTQGDRSEWRLDSLRDFISSSLTSEQVTDSIDFKTISVEDLKKKLYDIVEKNFEDKEKALGDPSQ MLEFEKVVILRVVDDRWTDHIDAMDQLRQSIGLRGYGQLNPLVEYQDSGYRMFEEMISNIEFDVTRLFMKAEIRQNISR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 2e-137 | 42 |
