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Name : lhv_2015 (lhv_2015) Accession : YP_001578127.1 Strain : Lactobacillus helveticus DPC 4571 Genome accession: NC_010080 Putative virulence/resistance : Unknown Product : Sin recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 1980020 - 1980628 bp Length : 609 bp Strand : - Note : - DNA sequence : ATGGCATTAGTTTTTTATGCAAGAGTTAGTAGTAAAGATCAGAATTTGGCAAGACAGTTAACACGTGCTAAAGAAATTAA AGCTGATAAAGTTTTTACCGATAAATATAGTGGGAAAAACTTAGATAGACCGGCTTTAAAACAAATGATGGAGTATCTTC GTGAGGGAGATACGCTTGAAGTGGTAAGTCTGGATAGATTAAGTCGTGATTATAACGATTTGAAGGAGCTAGTTCAGTCG CTGAGAAAAATGAAGGTTAGACTTATCGTTGATGATTTACCACAAGCACATACTAATAACGAATTAGTCGATCAATTTAT GATGGATATGATGATCCAATTAATGGGTTTCGTCGCTCAAAATGAAAGGGAGAAGATAAAAGAGAGGCAGGCTCAAGGTA TAAAAATTGCTAAGCAAAGAGGAGCTTATAAGGGTGGTACCATAAAATATGGCAGAAATTCGAAAGATCCTAAGAATCGT TTAGTTTGGCAAACTGTTATTGAGATGCTATACAATAGGAAGGAAAATCCTACAATTAGTGGAATTGCTCGTAAAGTAGG CATTAGTAGACAGCAAGTTTACCGAATAAAACAGAGAGAAAATTTGTAA Protein sequence : MALVFYARVSSKDQNLARQLTRAKEIKADKVFTDKYSGKNLDRPALKQMMEYLREGDTLEVVSLDRLSRDYNDLKELVQS LRKMKVRLIVDDLPQAHTNNELVDQFMMDMMIQLMGFVAQNEREKIKERQAQGIKIAKQRGAYKGGTIKYGRNSKDPKNR LVWQTVIEMLYNRKENPTISGIARKVGISRQQVYRIKQRENL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sin | YP_254225.1 | recombinase Sin | Not tested | ¥ðSh1 | Protein | 1e-38 | 44 |
| ef0061 | AAM75266.1 | EF0061 | Not tested | Not named | Protein | 2e-30 | 41 |
| EF0534 | NP_814310.1 | resolvase family site-specific recombinase | Not tested | Not named | Protein | 4e-30 | 41 |
