|
Name : lhv_2013 (lhv_2013) Accession : YP_001578125.1 Strain : Lactobacillus helveticus DPC 4571 Genome accession: NC_010080 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 1977819 - 1978997 bp Length : 1179 bp Strand : + Note : - DNA sequence : ATGAATGATTTTACCAAAAATATGGCACAAGCTCTATTCAATCAAGACAAAATAAACGATTTATTGCGCAAAGAACTCCA GCAAGCAGTTAATGACTTATTGGAAGCTGAACTGACTGCGTTTTTAGGCTATGATCCTTATGCCAGAACTGGCTGGAATA CCGGCAATTCACGCAATGGTGCTTACTTTCGCAAAGTTGATACGCAATTTGGCGAGATTGAAATTCAGGTGCCTAGGGAT CGCAATGGCATGTTTCATCAGCACACGCTGCCTGACTACAAGCAGCACTCCGATGTCTTGGAAAGCATGATTATCAAGCT ATATTCTAAAGGCGTAACCACCAGAGAAATAGCCGACTTGATTGAAAAGATGTACGGCAGTCATTACAGCCCAGCTCAGG TATCTAACATCTCCAAGCAGATGATTCCAAAAGTTGAGGCCTATCATCAGCGCAAACTCAGTGACAAGTTCTTCTGCGTT TATTTAGACGCAACTTACATTCCTTTGCGTCGCATAACCTTTGATCGTGAAGCAGTTTATATTGCCATTGGCATCAAGCC TAATGGTCACAAGGAAGTTATCGATTACCGCATTGCTCCCAGCGAAAACGTTGAGAATTGGACGGAAATGCTTCAAGACA TGAAGTCTCGCGGTCTAGAGCAGGTTGAGCTCTTTCTTTCAGATGGCGTTGTTGGTATGAAAACAGCGTTGGAGCAGACT TATCCGAAAGCTCATTTTCAACGCTGTCTAGTTCATGTCATGCGTAATATTTGCGCTAAAGTACGCGTAGATGATCGCGA AACGATCATGAATGAATTCAAGCAAATCCATCAACAGCCAAATAAAGAAGCTGCGATCAAAGTCTTGCACGCCTTCTATG ACAAGTGGAACAGAGCTTATAATCATGTCATTAGAAACCTCAAGGAGATTGAACCTGATCTGCTGGTCTTTTATGACTAT CCTAAACAAATCAGGGCCTCAATTTACTCCACCAATATGATCGAATCCTTTAACAACGTTATCAAGCGTAAAGCTAAGCC TAAAGCAGAGTTTCCAACTGAACAGTCGCTTGATACTTTTATTGGCATTCAGGCGATGAGCTACAACGAGCGCTATTTCA ATCGAATCCACAAAGGCTTTGGTCAGGTTCAGGATACCTTAGAATCCTACTTTGATTAA Protein sequence : MNDFTKNMAQALFNQDKINDLLRKELQQAVNDLLEAELTAFLGYDPYARTGWNTGNSRNGAYFRKVDTQFGEIEIQVPRD RNGMFHQHTLPDYKQHSDVLESMIIKLYSKGVTTREIADLIEKMYGSHYSPAQVSNISKQMIPKVEAYHQRKLSDKFFCV YLDATYIPLRRITFDREAVYIAIGIKPNGHKEVIDYRIAPSENVENWTEMLQDMKSRGLEQVELFLSDGVVGMKTALEQT YPKAHFQRCLVHVMRNICAKVRVDDRETIMNEFKQIHQQPNKEAAIKVLHAFYDKWNRAYNHVIRNLKEIEPDLLVFYDY PKQIRASIYSTNMIESFNNVIKRKAKPKAEFPTEQSLDTFIGIQAMSYNERYFNRIHKGFGQVQDTLESYFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0595 | NP_814357.1 | ISEf1, transposase | Not tested | Not named | Protein | 5e-104 | 52 |
| unnamed | AAM21176.1 | transposase | Not tested | Not named | Protein | 3e-104 | 52 |
| unnamed | AAM21184.1 | transposase | Not tested | Not named | Protein | 3e-104 | 52 |
| ef0057 | AAM75262.1 | EF0057 | Not tested | Not named | Protein | 3e-104 | 52 |
