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Name : lhv_1788 (lhv_1788) Accession : YP_001577957.1 Strain : Lactobacillus helveticus DPC 4571 Genome accession: NC_010080 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 1757645 - 1758664 bp Length : 1020 bp Strand : - Note : - DNA sequence : ATGGACTCTTTACATTCTACCATGAATCAGCACGTTAAAGGCAAGCACTTGTCATTGGAAGAACGGGTTATTATTCAAAC TAGCTTAAAAGATGGCTGCTCTCCTTCTACGATCAGCTATGAAGTCAGACGGGGCACTGTTTCTCTCTATCACGGCAAGC AGAAGCGCTACAAGGCTGATCAGGGCCAAAGCGTTTATCAAATAAATCGGCGCCACTGTGGCCGCAAATCAGCTTTCTTG AAGAAGGCTGGCTTTATCAATTATGTCATTAAGCATTTCTTTGAAGACGGCTGGTCGCTTGACGTTTGTGCCAACCGTAG TTTAGCTGCCGGGGAATTCTCGCATTATCAAACAGTCTGCACCAGAACCCTGTACAACTACGTTGATCAAGGACTGATGA CCATCAAAAACTATGACTTGCCCGAAAAGCTCAAGCGCAATACCAAGCTTCATCATGTTCGCCAAAACAAGAAGAAGCTG GGACGAAGCATCGAAGAGCGGCCTAAAGAGATTGAGCAGCGCAGCGAATTTGGTTATTGGGAATGCGATCTTGTCTTGGG TCATAAGACCAAGGACGATCAGGTTCTGTTAACTCTTTCCGAGCGCATGAGCCGCGAATTCCTGATTATACGTATACCTG ACAAGACCTCTGCCAGCGTCATACAGGCTTTTCAAATGCTTCAAAAACAGTACAGCGAGCATTGGAACGATATCTTTAAG ATAATTACTACTGATAATGGTTCAGAGTTTGCGGATCTAGCTAATCTGGAACAAGTCTCTAAAAAGCTTATTTATTATGC TCATCCTTATACTTCTTGTGATAAAGGAACTGTTGAAAGACATAATGGCCTGATCCGCAGATTCATTCCTAAAGGAGACT GCATCAATAACTATTCTCTCCAACAAATCATTGATATTGAAACCTGGTGCAACTCTTTGCCCAGAAAGATCCTGGCATAT CATACGCCAGATGGAGACTGTAAAATAGTTTGTGTAAGGATGAATGATTCCTTAAATTAA Protein sequence : MDSLHSTMNQHVKGKHLSLEERVIIQTSLKDGCSPSTISYEVRRGTVSLYHGKQKRYKADQGQSVYQINRRHCGRKSAFL KKAGFINYVIKHFFEDGWSLDVCANRSLAAGEFSHYQTVCTRTLYNYVDQGLMTIKNYDLPEKLKRNTKLHHVRQNKKKL GRSIEERPKEIEQRSEFGYWECDLVLGHKTKDDQVLLTLSERMSREFLIIRIPDKTSASVIQAFQMLQKQYSEHWNDIFK IITTDNGSEFADLANLEQVSKKLIYYAHPYTSCDKGTVERHNGLIRRFIPKGDCINNYSLQQIIDIETWCNSLPRKILAY HTPDGDCKIVCVRMNDSLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-68 | 49 |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-68 | 49 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-69 | 49 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-69 | 49 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-69 | 49 |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-69 | 49 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-67 | 49 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-68 | 49 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-68 | 49 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-46 | 46 |
