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Name : lhv_1734 (lhv_1734) Accession : YP_001577911.1 Strain : Lactobacillus helveticus DPC 4571 Genome accession: NC_010080 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1699511 - 1700818 bp Length : 1308 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATATTAAGGTGATTCGTGAGAATCTCGATTGGTCAAAGAAAAAGTTAGCTACACGTGGCATCAAGCCAGAAGA ATTGGATGAATTGGTTGAAATTGATGCTAAGCGTCGTAAGGATTTAACCAAGAGTGAACAATTAAAGGCTAAGCGTAATG ACGTTTCTAAGCAAATTGCTGAAAAGAAGCGCAATAAGGAAGACGCAAGTGATGCTATTCAAGCTATGCGTGAAGTAGGT AAGGAAATCAAAGACTTAGATAAAGAAGTCGCTGAATTGACTGAAAAGCAAAACTACATTTTGCTTAGATTGCCTAACTT CCCAGCAGATTCAGATCCAATCGGCCCTGATGATAGCTACAATGAAGAAGTTCGTAAATGGAATGAACCAACTAAGTTTG ACTTTAAGCCAAAGGCTCACTGGGACATTGGTACTGACCTTGGTATTTTAGACTGGGATCGTGCTTCTAAAGTTTCAGGT GCACGTTTTGTTTACTACATTGGTGCAGGTGCGCTTTTGGAACGTGCTGTCTTTAACTTCTTCCTTGATGAAAACACTAA GGATGGCTATACCGAAGTTATTCCACCATACCTTGTTAACGATGCATCAATGCAAGGTACTGGACAATTCCCTAAGTTCC ACGAAGATGTTTATACTATCGTAGATAACGACGATCCAGATAAGCCACGTGACTTGACTTTGATTCCAACTGCTGAAGTT CCTTTGGTAAACTACTTCAGAAATGAAATTATTCATGAAAACAAGTTACCAATCAACGTAACTGCTTTATCACCAGCATT TAGAAGTGAAGCAGGTTCAGCAGGTCGTGATACTCGTGGTTTGATTAGAATGCACGAATTCCGCAAAGTTGAAATGGTTA AGGTATGTAAGCCAGATGAATCATGGGATGAACTTGAAAAGTTGACCCACAATGCTGAACACTTATTGCAAAAGTTAGGT TTGCCATATCACGTAGTCGCTTTGTCAACTGGGGATGCAAGTTTTACTAGTGCTAGGACTTACGATCTTGAAGTTTGGAT GCCTGCACAAGACAAGTACCGTGAAATTTCAAGTTGTTCTAACTGTACTGACTTTCAAGCTCGTCGTGCACAAATTCGTT ACCGTGACGAAGATGGCAAGCTTCACTTAGCTCATACTTTAAATGGTTCTGGTTTAGCCGTAGGTAGAGCAGTAGCTGCA ATTTTGGAAAACTACCAAAACGAAGATGGTTCTGTAACTGTTCCTGATGTTCTTGTACCATACATGAATGGTATGAAGAA GATTACTAAAGAATCAGGTTTGATTTAA Protein sequence : MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDAKRRKDLTKSEQLKAKRNDVSKQIAEKKRNKEDASDAIQAMREVG KEIKDLDKEVAELTEKQNYILLRLPNFPADSDPIGPDDSYNEEVRKWNEPTKFDFKPKAHWDIGTDLGILDWDRASKVSG ARFVYYIGAGALLERAVFNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPTAEV PLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPDESWDELEKLTHNAEHLLQKLG LPYHVVALSTGDASFTSARTYDLEVWMPAQDKYREISSCSNCTDFQARRAQIRYRDEDGKLHLAHTLNGSGLAVGRAVAA ILENYQNEDGSVTVPDVLVPYMNGMKKITKESGLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-131 | 65 |
