Gene Information

Name : lhv_1228 (lhv_1228)
Accession : YP_001577544.1
Strain : Lactobacillus helveticus DPC 4571
Genome accession: NC_010080
Putative virulence/resistance : Resistance
Product : stress induced DNA-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0783
EC number : -
Position : 1205626 - 1206093 bp
Length : 468 bp
Strand : +
Note : -

DNA sequence :
ATGCAATATCAAAAGACCAAAGAAATTTTAAATCAAGCAGTTGCTGATCTTAGTCAATTACAAATGGTAGTACGTCAACA
ACACTGGTACATGCGTGGACCAGAATTTTTAAACTTACACCCATACTTAGATGATGTAATGTCTGAATTAAACGATCAAC
GTGATTTAATCGCTGAAAGATTAATTACTATTGATGGCTCTCCATACTCTAGCTTGGCAGAAATGGTAGATCATTCAACC
ATTGAAGCTCATCCTGGCAAGTGGGGTACACCTACTACTGAGCGTTTTGCTACTATCGTTGATGGTTATCATCACTTGGC
ACACCTTTATGAAAAAGGTATCAAAGCTGCAGATGAAGAAGGAGACTACAGTTCAAGTGATATCTTAACTACTTGTCACA
ATGATCTTGAAAAGAGAATTTGGATGATGGCAGCTGAGATTAATCAAGCACCTAACATTGACGAATAA

Protein sequence :
MQYQKTKEILNQAVADLSQLQMVVRQQHWYMRGPEFLNLHPYLDDVMSELNDQRDLIAERLITIDGSPYSSLAEMVDHST
IEAHPGKWGTPTTERFATIVDGYHHLAHLYEKGIKAADEEGDYSSSDILTTCHNDLEKRIWMMAAEINQAPNIDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0606 NP_814364.1 Dps family protein Not tested Not named Protein 7e-32 47
ef0119 AAM75320.1 EF0119 Not tested Not named Protein 5e-32 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lhv_1228 YP_001577544.1 stress induced DNA-binding protein BAC0134 Protein 8e-27 42