Gene Information

Name : lhv_1163 (lhv_1163)
Accession : YP_001577500.1
Strain : Lactobacillus helveticus DPC 4571
Genome accession: NC_010080
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1148019 - 1148801 bp
Length : 783 bp
Strand : -
Note : -

DNA sequence : 
TTGAAGCGTGAGGATCAAGATGAGATAAAGCATCATAACCTAATCAAACGAATTAAAGAAATCTGCTTTGAACTTAAAGC
TAGATACACAGCACCAGGATACCGCACTATAACCGATCACCTGCATAATGAAGGCTTCAAAATAAACCGTAAAACGGTCT
ATCGCTTAATGCGAAAGCTTAAACTGATCGGATATCGTATGAAACGTAAAAAGAGATACGATAGCTTTGAAGGTGAGATT
GAAGATAGAATTAAGCCTGATTTAATTAAACGCAGCTTCTTTGCCATTAAACCAAGCATGAAGTGGTACACAGATATAAC
TGAATTCAACTTAAGAGGACAAAAACTCTATTTATCTCCAATTATTGATGGATGCGGTAGAGATATAGTTGCTTACAATA
TTTCACGTCATCCAAATTTAAATCAAGCAATGACAATGCTTGATGATGCATTTAAAGCTAATCCAGCATTAAATGAATTA
GTATTTCATTCAGATCGTGGATGGCAATATCAACATAAAGCATATCAATATGAACTTGCATGTCACGGTATTGAACAAAG
CATGTCTAGAAAAGGTTGCTCTCCTGATGATGGACTTATAGAAGGCTTCTTTGGCATGCTTAAACGAGAAATGTTCTATG
GCAAAGAATCAAATTATGCAAATTTAAATGAATTAGAGAAAGCAATAAAAGATTATATTCACTTTTATAACTATGAAAGA
ACAAAGACAAAACTAAAAGGACTGACTCCGATTCAATATCGAAATCAATCCTTAGTTGCTTAA

Protein sequence : 
MKREDQDEIKHHNLIKRIKEICFELKARYTAPGYRTITDHLHNEGFKINRKTVYRLMRKLKLIGYRMKRKKRYDSFEGEI
EDRIKPDLIKRSFFAIKPSMKWYTDITEFNLRGQKLYLSPIIDGCGRDIVAYNISRHPNLNQAMTMLDDAFKANPALNEL
VFHSDRGWQYQHKAYQYELACHGIEQSMSRKGCSPDDGLIEGFFGMLKREMFYGKESNYANLNELEKAIKDYIHFYNYER
TKTKLKGLTPIQYRNQSLVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 3e-53 50
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 3e-53 50
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 2e-45 47
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 4e-40 43
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 1e-33 41