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Name : hslU (lhv_1078) Accession : YP_001577430.1 Strain : Lactobacillus helveticus DPC 4571 Genome accession: NC_010080 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 1056846 - 1058249 bp Length : 1404 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGGCTATTAAAACACCAAAAGAAATAGTTAAGATCTTAAACGAATACATTATTGGTCAAGATGAAGCTAAAAAGTCAGT GGCAATTGCTCTTTACAACCGTTACCGTAGAATGCAATTGTCTAAGCAAATGCAACACGAAATTACCCCTAAGAACTTGC TGATGGCAGGTCCTACAGGTGTAGGTAAAACTGAAATTGCACGTCGTTTAGCTTCAATTGTTGAAGCTCCATTTGTAAAA GTAGAAGCTACTAAGTTTACTGAAGTAGGTTACGTTGGTCGTGATGTTGAATCAATGGTTCGTGACTTAGTAGGCGAAGC TGTGCGCATGGAAGAAAAGGATCAATTTGCACGTGTGAAGCCACAAGCTACTAAAGAAGCTAATAAGCAGTTAGTTCGTT TGCTCGCTCCAGGCGTTAAACGCGAAAAGCGTGAAAACCAGATGCAACAAATGCAAGACATGATGTCAATGTTAATGGGC GGTGCAAATCCAAATAATCAAAATAACGATCAAGAAGAAGTAACTGATGAAGTTAGAAATGAGCGTATGGATGTAGCTGA AAAGCTAAACAAAGGCTTGCTTGAAGATCGTGAAGTAACCATTGAAGTTGAACAAGCTCCTAAGGCCAACCCAATGAGTG ACATGATGGGACAAATGGGAATGGACATGGGTTCAATGCTTAATGACATTATGCCAAAGAAGAAGGTTAAGCGTACTTTG TCTGTTCGCGATGCACGTGAAGTCTTGATTCAGGAAGAATCACGCAAGATGGTAGATTATGATACTATTTATCAACGTGC TATTGAGAGAAGTCAAAACAACGGTATTATTTTTATCGATGAAATTGATAAAATTATTGCTGGTAATAAGCGTAATTCTG GTGAAGTTTCTCGTGAAGGTGTACAAAGAGACGTTTTGCCAATTGTTGAAGGTTCAACTGTAAATACTAAGTATGGTCCT GTCTCTACTGATCATATTTTGTTTATTGCTGCTGGTGCCTTTGCTGAAAGCAAGCCAAGCGATTTGATCCCAGAACTTCA AGGTCGTTTTCCAATTAGAGTAGAGCTCAATGCTTTAACTAAGGACGACTTTGTCAAAATCTTGAAAGACCCTCAAAATT CATTGCTTAAGCAATATATTGCTTTAATGAAAGCTGATGGTATTAAATTGATCTTCACTCAAGAAGCAGTTGATAAGATT GCTCAAATTGCCTTTGACGTTAACCAAGGTACAGATAATATCGGTGCAAGACGTCTTTCAACTATTCTTGAAAAATTGCT TGAAGATGTTTTATATGAAGGTCCTGATATGGAAATGGGCGAGATTACCATTACCGAAGCATACGTTGAAGAAAAATTAC ATGATATTATCATGAATAAGGACTTAACTAAGTTTATTTTATAA Protein sequence : MAIKTPKEIVKILNEYIIGQDEAKKSVAIALYNRYRRMQLSKQMQHEITPKNLLMAGPTGVGKTEIARRLASIVEAPFVK VEATKFTEVGYVGRDVESMVRDLVGEAVRMEEKDQFARVKPQATKEANKQLVRLLAPGVKREKRENQMQQMQDMMSMLMG GANPNNQNNDQEEVTDEVRNERMDVAEKLNKGLLEDREVTIEVEQAPKANPMSDMMGQMGMDMGSMLNDIMPKKKVKRTL SVRDAREVLIQEESRKMVDYDTIYQRAIERSQNNGIIFIDEIDKIIAGNKRNSGEVSREGVQRDVLPIVEGSTVNTKYGP VSTDHILFIAAGAFAESKPSDLIPELQGRFPIRVELNALTKDDFVKILKDPQNSLLKQYIALMKADGIKLIFTQEAVDKI AQIAFDVNQGTDNIGARRLSTILEKLLEDVLYEGPDMEMGEITITEAYVEEKLHDIIMNKDLTKFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 3e-85 | 47 |
