Gene Information

Name : USA300HOU_0850 (USA300HOU_0850)
Accession : YP_001574750.1
Strain : Staphylococcus aureus TCH1516
Genome accession: NC_010079
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 895944 - 897164 bp
Length : 1221 bp
Strand : -
Note : -

DNA sequence :
ATGTGGTTAGAAAAATTTAAAAATAAGAATAAAGAAACTAAATATAGATATTACGAGAAGTACAAAGACCCTCTCACTGC
CAAATGGAGACGTGTTAGCGTGGTACTTAATAAGAATGGTAAGCAATCACAAAAAGAAGCTCAAAGACTCTTAAATGAGC
GTATAGAAGAAAAACTGAATGATAAGAAACCTACTACACTTAAGTCACTAACTTTCCATGTCGCATGTGATGAGTGGTTT
CAGAATTATATCAAAACGTCTGGGTCAAAAAGAACAACTATTAAAACTAAATTGAGTAAGCTAAACACTTTGAAGAAATT
TGTAGATGAAGATATTTTAATCAATAAAATAACACTTTCATATGCGCAACAAGTTTTCGATGAAATGGATAGTAAAGGTT
ATGTATATCAAGTAAACAAAGATGCGTTAAGCATATTCAAAAATGTATTTGAATACACTAGACGTATCTATAAACTGCAA
GATTTAGAATTTTTAAAAGATATAACATTAAATAAAAGAATTAAGTCTTATGATGAAGTGAAAGCTAAACGTAATAAGTA
CCTCGAATTAAATGAAATAGAATCTATCATCAAAGATATTAATACGAAGGCTCAGAAGATGCACTCAGGTATCCATAAGC
GGTTTTATTTATTCGTTGCACTCATGACAGAATTCCAAGCCTTAAATGGTATGCGTATTGGTGAAATGTTAGCCATTCAA
AATGAAGATATAGACTTTGATAATAAGAGTTTAAATATTAACGGAACAATCCATTGGTTTCACGATGAATCTGGTGGATT
CGGTGTAAAAGATACCACTAAAACAGAGTCTAGTTATAGAACAATTGGATTGAGTAGCAGAAGTTGCGAGATATTAAAGA
AAGCAATACTGGAGAACAAAAAGGATTCAAAATGGAATGATGGATATCTAAATAGAAATTTTGTATTTACTAATCATAAA
GGCAACCCAATGCAGACTGAAAGATTCAATAAAATCCTTAGGGAAGCAGCTAAAGATGTTGGTATTGATAAAGAAGTTTC
TTCACATATATTAAGACATAGCCACATATCATTACTCTCTCAACAAGGCGTGTCACTTAAAGCTATTATGGATCGTGTAG
GCCATTCCGACCACCGTACAACACTTTCCATTTATTCTCACGTTACTGAACAGATGGATAAGGATATGATGAACAAACTT
GAACAGGTAAAACTTGGATAA

Protein sequence :
MWLEKFKNKNKETKYRYYEKYKDPLTAKWRRVSVVLNKNGKQSQKEAQRLLNERIEEKLNDKKPTTLKSLTFHVACDEWF
QNYIKTSGSKRTTIKTKLSKLNTLKKFVDEDILINKITLSYAQQVFDEMDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQ
DLEFLKDITLNKRIKSYDEVKAKRNKYLELNEIESIIKDINTKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEMLAIQ
NEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAILENKKDSKWNDGYLNRNFVFTNHK
GNPMQTERFNKILREAAKDVGIDKEVSSHILRHSHISLLSQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKL
EQVKLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int YP_493499.1 integrase Not tested SaPI5 Protein 1e-161 100
SACOL0885 YP_185756.1 pathogenicity island protein, integrase Not tested vSa1 Protein 1e-160 99
int AAL04148.1 integrase-like protein Not tested SaPI3 Protein 9e-161 99
int AAC28969.1 integrase Not tested SaPI1 Protein 4e-158 98
SAAV_0787 YP_003281710.1 pathogenicity island protein, integrase Virulence SaPIAv Protein 8e-157 96
SAOV_0274 YP_005735791.1 putative prophage integrase Not tested ¥ÕSa1 Protein 3e-62 48
int NP_646259.1 integrase Not tested ¥ÕSa2 Protein 2e-61 47
SAUSA300_1438 YP_494135.1 phiSLT ORF401-like protein, integrase Not tested ¥ÕSa2 Protein 1e-61 47
SAR0366 YP_039823.1 integrase Not tested SaPI4 Protein 3e-69 47