Gene Information

Name : USA300HOU_0084 (USA300HOU_0084)
Accession : YP_001574004.1
Strain : Staphylococcus aureus TCH1516
Genome accession: NC_010079
Putative virulence/resistance : Resistance
Product : P-ATPase superfamily P-type ATPase copper (Cu2+) transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.4
Position : 86040 - 88064 bp
Length : 2025 bp
Strand : +
Note : -

DNA sequence :
ATGAATCATTCCAATCAAATGCATCATGATAACCATGCCTCACATGATCATCATAGTGGCCATGCACATCATCATGGAAA
TTTTAAAGTTAAGTTTTTTGTTTCATTAATTTTTGCAATACCTATCATTCTTTTATCGCCACTGATGGGTGTTAACTTAC
CTTTTCAATTCACATTTCCAGGTTCTGAATGGGTAGTGTTAATATTAAGTACAATTTTATTCTTTTATGGTGGTAAACCG
TTCTTGTCTGGTGGTAAAGATGAAATTGCTACAAAAAAACCAGGCATGATGACCTTAGTTGCCCTAGGTATTTCAGTAGC
TTATATTTATAGCTTGTATGCTTTTTATATGAATAACTTTAGTAGTGCAACTGGTCATACAATGGACTTTTTTTGGGAAT
TAGCAACCTTAATTTTAATTATGCTATTAGGACATTGGATAGAAATGAATGCTGTCGGAAATGCTGGAGATGCTTTAAAG
AAAATGGCAGAACTGTTACCTAATAGTGCTATTAAAGTTATGGATAATGGCCAACGCGAAGAAGTTAAAATATCAGACAT
CATGACTGATGATATCGTCGAAGTAAAAGCCGGAGAAAGCATTCCAACAGATGGTATTATCGTTCAAGGACAAACATCTA
TAGATGAATCCCTAGTCACTGGAGAATCTAAAAAAGTACAAAAAAATCAAAATGACAACGTCATCGGGGGTTCTATTAAT
GGGTCTGGAACAATACAAGTCAAGGTTACAGCTGTGGGAGAAGATGGATATCTTTCTCAAGTTATGGGACTTGTTAATCA
AGCACAAAATGATAAATCTAGTGCTGAATTGTTATCTGATAAAGTAGCGGGTTATTTATTCTACTTTGCTGTAAGTGTTG
GCGTGATTTCTTTTATTGTCTGGATGCTCATTCAAAATGATGTTGATTTTGCATTAGAACGTCTTGTAACTGTGTTAGTC
ATTGCTTGTCCACATGCTTTAGGCTTGGCAATACCTTTAGTCACTGCACGTTCTACTTCAATTGGTGCACATAATGGTTT
AATTATTAAAAATAGAGAGTCTGTAGAAATAGCTCAACATATCGATTATGTAATGATGGACAAAACTGGTACTTTAACTG
AGGGTAACTTTTCTGTGAATCATTATGAGAGCTTTAAAAATGATTTGAGTAATGATACAATATTAAGCCTTTTCGCCTCA
TTAGAAAGTCAATCTAATCACCCATTAGCTATAAGTATTGTTGATTTTGCGAAAAGTAAAAATGTTTCATTTACTAACCC
ACAAGACGTTAATAATATTCCAGGTGTCGGATTAGAAGGTCTAATTGATAATAAAACATATAAAATAACAAATGTCTCTT
ATCTTGATAAACATAAACTTAATTATGACGATGACTTGTTTACTAAATTAGCTCAACAAGGTAATTCAATCAGTTATTTA
ATTGAGGATCAACAAGTCATTGGCATGATTGCTCAAGGAGATCAAATTAAAGAAAGCTCAAAACAAATGGTAGCTGATTT
ACTATCAAGAAATATTACACCAGTCATGCTTACAGGTGACAATAATGAAGTGGCACACGCTGTCGCAAAAGAATTAGGTA
TTAGTGATGTCCACGCACAACTCATGCCAGAAGATAAGGAAAGCATTATAAAAGATTATCAAAGTGACGGTAATAAAGTC
ATGATGGTCGGAGACGGTATCAACGATGCGCCGAGTCTTATAAGAGCGGATATTGGTATAGCAATTGGTGCAGGTACAGA
TGTTGCAGTGGATTCAGGTGATATCATACTTGTTAAAAGTAATCCATCAGATATCATTCATTTCTTGACCCTTTCAAATA
ATACTATGAGAAAAATGGTGCAAAACTTATGGTGGGGTGCAGGTTATAATATTGTTGCTGTACCTTTAGCAGCTGGTATT
TTAGCATTTATTGGCTTGATTTTATCACCTGCAATAGGTGCTATTTTAATGTCTTTAAGTACAATTATCGTTGCAATTAA
TGCCTTTACATTAAAATTAAAATAA

Protein sequence :
MNHSNQMHHDNHASHDHHSGHAHHHGNFKVKFFVSLIFAIPIILLSPLMGVNLPFQFTFPGSEWVVLILSTILFFYGGKP
FLSGGKDEIATKKPGMMTLVALGISVAYIYSLYAFYMNNFSSATGHTMDFFWELATLILIMLLGHWIEMNAVGNAGDALK
KMAELLPNSAIKVMDNGQREEVKISDIMTDDIVEVKAGESIPTDGIIVQGQTSIDESLVTGESKKVQKNQNDNVIGGSIN
GSGTIQVKVTAVGEDGYLSQVMGLVNQAQNDKSSAELLSDKVAGYLFYFAVSVGVISFIVWMLIQNDVDFALERLVTVLV
IACPHALGLAIPLVTARSTSIGAHNGLIIKNRESVEIAQHIDYVMMDKTGTLTEGNFSVNHYESFKNDLSNDTILSLFAS
LESQSNHPLAISIVDFAKSKNVSFTNPQDVNNIPGVGLEGLIDNKTYKITNVSYLDKHKLNYDDDLFTKLAQQGNSISYL
IEDQQVIGMIAQGDQIKESSKQMVADLLSRNITPVMLTGDNNEVAHAVAKELGISDVHAQLMPEDKESIIKDYQSDGNKV
MMVGDGINDAPSLIRADIGIAIGAGTDVAVDSGDIILVKSNPSDIIHFLTLSNNTMRKMVQNLWWGAGYNIVAVPLAAGI
LAFIGLILSPAIGAILMSLSTIIVAINAFTLKLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 0.0 98

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
USA300HOU_0084 YP_001574004.1 P-ATPase superfamily P-type ATPase copper (Cu2+) transporter BAC0079 Protein 3e-179 57
USA300HOU_0084 YP_001574004.1 P-ATPase superfamily P-type ATPase copper (Cu2+) transporter BAC0383 Protein 3e-145 49
USA300HOU_0084 YP_001574004.1 P-ATPase superfamily P-type ATPase copper (Cu2+) transporter BAC0629 Protein 1e-126 46