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Name : USA300HOU_0074 (USA300HOU_0074) Accession : - Strain : Staphylococcus aureus TCH1516 Genome accession: NC_010079 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 76215 - 76888 bp Length : 674 bp Strand : + Note : frameshift of IS431mec transposase DNA sequence : ATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAG TTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAAT ATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACATCA AAATAAAAGGAAAATGGAGCTATTTATATCGTGCCATTGATGCAGAGGGATATACATTAGATATTTGGTTGCGTAAGCAA CGAGATAATCATTCAGCATATGCGTTTATCAAACGTCTCATTAAACAATTTGGTAAACCTCAAAAGGTAATTACAGATCA GGCACCTTCAACGAAGGTAGCAATGGCTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGTTATTGTACATCGAAAT ATCTGAATAACCTCATTGAGCAAGATCACTGTCATATTAAAATAAGAAAGACAAGGTATCAAAATATCAATACAGCAAAG AATACTTTAAAAGGTATTGAATGTATTTACGCTCTATATAAAAAGAACCGCAGGTCTCTTCAGATCTACGGATTTTCGCC ATGCCACGAAATTAGCATCATGCTAGCAAGTTAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAPIG0054 | YP_005732864.1 | transposase | Not tested | Type-V SCCmec | DNA | 0.0 | 99 |
| SE0090 | NP_763645.1 | transposase for IS-like element | Not tested | SCCpbp4 | DNA | 0.0 | 99 |
| tnp | BAC67570.1 | transposase of IS431mec | Not tested | Type-IVc SCCmec | DNA | 0.0 | 98.8 |
| tnp | YP_251940.1 | transposase for IS431mec | Not tested | SCCmec | DNA | 0.0 | 98.8 |
| SAR0027 | YP_039504.1 | transposase | Not tested | Type-II SCCmec | DNA | 0.0 | 98.8 |
| tnp | - | - | Not tested | Type-IVc SCCmec | DNA | 0.0 | 98.8 |
| tnp | BAA86652.1 | transposase | Not tested | Type-I SCCmec | DNA | 0.0 | 98.8 |
| tnp | YP_252002.1 | transposase for IS431mec | Not tested | SCCmec | DNA | 0.0 | 98.8 |
| unnamed | BAB47631.1 | putative transposase of IS431 | Not tested | Type-III SCCmec | DNA | 0.0 | 98.8 |
| SA0034 | NP_373274.1 | transposase for IS-like element | Not tested | Type-II SCCmec | DNA | 0.0 | 98.8 |
| tnp | YP_252034.1 | transposase for IS431mec | Not tested | SCCmec | DNA | 0.0 | 98.8 |
| SERP2526 | YP_190067.1 | IS431mec-like transposase | Not tested | Type-II SCCmec | DNA | 0.0 | 98.8 |
| SA0026 | NP_373265.1 | transposase for IS-like element | Not tested | Type-II SCCmec | DNA | 0.0 | 98.8 |
| unnamed | BAB47638.1 | putative transposase of IS431 | Not tested | Type-III SCCmec | DNA | 0.0 | 98.8 |
| tnp | NP_370560.2 | transposase for IS-like element | Not tested | Type-II SCCmec | DNA | 0.0 | 98.8 |
| unnamed | BAB47648.1 | putative transposase of IS431 | Not tested | Type-III SCCmec | DNA | 0.0 | 98.8 |
| SAUSA300_0028 | YP_492748.1 | putative transposase | Not tested | Type-IV SCCmec | DNA | 0.0 | 98.8 |
| SE0071 | NP_763626.1 | transposase for IS-like element | Not tested | SCCpbp4 | DNA | 0.0 | 98.8 |
| tnp | NP_370551.1 | transposase for IS-like element | Not tested | Type-II SCCmec | DNA | 0.0 | 98.8 |
| unnamed | BAA82228.1 | transposase for insertion sequence-like element IS431mec | Not tested | Type-II SCCmec | DNA | 0.0 | 98.8 |
| tnp | BAB72117.1 | transposase of IS431mec | Not tested | Type-IVa SCCmec | DNA | 0.0 | 98.8 |
| SAMSHR1132_00280 | YP_005324552.1 | putative transposase | Not tested | Type-IIIinv SCCmec | DNA | 0.0 | 98.8 |
| SACOL0028 | YP_184939.1 | IS431mec, transposase | Not tested | Type-I SCCmec | DNA | 0.0 | 98.8 |
| unnamed | BAA82238.1 | transposase for insertion sequence-like element IS431mec | Not tested | Type-II SCCmec | DNA | 0.0 | 98.8 |
| tnp | BAB72136.1 | transposase of IS431mec | Not tested | Type-IVb SCCmec | DNA | 0.0 | 98.8 |
| SAR0034 | YP_039511.1 | transposase | Not tested | Type-II SCCmec | DNA | 0.0 | 98.8 |
| unnamed | BAB47635.1 | putative transposase of IS431 | Not tested | Type-III SCCmec | DNA | 0.0 | 98.7 |
| MW0027 | NP_644842.1 | transposase for IS-like element | Not tested | Type-IV SCCmec | DNA | 0.0 | 98.7 |
| SE0079 | NP_763634.1 | transposase for IS-like element | Not tested | SCCpbp4 | DNA | 0.0 | 98.7 |
| unnamed | ACL99852.1 | transposase | Not tested | Type-V SCCmec | DNA | 0.0 | 98.5 |
| SERP1579 | YP_189144.1 | IS431mec-like transposase | Not tested | ¥ÕSP¥â | DNA | 0.0 | 98.5 |
| SERP2219 | - | - | Not tested | vSe1 | DNA | 0.0 | 98.5 |
| tnp | BAD24823.1 | transposase for IS431 | Not tested | Type-V SCCmec | DNA | 0.0 | 98.5 |
| tnp | BAG06195.1 | transposase for IS431 | Not tested | Type-VII SCCmec | DNA | 0.0 | 98.5 |
| SAPIG0038 | YP_005732848.1 | transposase | Not tested | Type-V SCCmec | DNA | 0.0 | 98.5 |
| tnp | YP_252008.1 | transposase for IS431mec | Not tested | SCCmec | DNA | 0.0 | 97.9 |
| unnamed | BAD24828.1 | transposase for IS431 | Not tested | Type-V SCCmec | DNA | 0.0 | 97.6 |
| unnamed | AAP55235.1 | transposase | Not tested | SaPIbov2 | DNA | 0.0 | 97.2 |
| tnp | YP_254240.1 | transposase for IS431mec | Not tested | ¥ðSh1 | DNA | 0.0 | 96.8 |
