Gene Information

Name : vraF (USA300HOU_0682)
Accession : YP_001574583.1
Strain : Staphylococcus aureus TCH1516
Genome accession: NC_010079
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 734768 - 735529 bp
Length : 762 bp
Strand : +
Note : -

DNA sequence : 
GTGGCAATTTTAGAAGTAAAACAATTAACAAAAATATATGGAACTAAAAAAATGGCACAAGAAGTGTTGCGAGATATCAA
TATGTCTATTGAAGAAGGCGAGTTTATTGCTATTATGGGTCCCTCTGGATCTGGGAAAACGACATTATTAAATGTTTTAA
GTTCAATTGATTATATTTCACAAGGTTCTATTACATTAAAAGGAAAAAAATTAGAAAAGCTTTCAAACAAGGAATTATCT
GATATACGCAAGCATGATATTGGTTTTATTTTTCAAGAGTATAATTTACTGCATACATTGACTGTTAAAGAAAACATAAT
GTTACCACTAACGGTACAGAAGTTAGATAAAGAACATATGTTAAATCGTTATGAAAAAGTAGCAGAAGCATTAAATATAT
TGGATATTAGTGATAAATATCCCTCTGAATTGTCTGGTGGACAAAGGCAACGAACATCAGCTGCCAGAGCATTTATAACA
TTGCCTTCTATTATATTTGCTGACGAACCAACAGGTGCATTGGATTCTAAAAGTACTCAAGATTTATTAAAACGATTAAC
AAGAATGAATGAAGCATTTAAGTCTACAATTATTATGGTAACGCATGATCCTGTTGCAGCAAGCTATGCAAATCGAGTAG
TGATGCTAAAAGATGGTCAAATTTTCACTGAATTATACCAAGGGGATGACGATAAACATACCTTTTTCAAAGAAATAATA
CGTGTACAAAGTGTTTTAGGTGGCGTTAATTATGACCTTTAA

Protein sequence : 
MAILEVKQLTKIYGTKKMAQEVLRDINMSIEEGEFIAIMGPSGSGKTTLLNVLSSIDYISQGSITLKGKKLEKLSNKELS
DIRKHDIGFIFQEYNLLHTLTVKENIMLPLTVQKLDKEHMLNRYEKVAEALNILDISDKYPSELSGGQRQRTSAARAFIT
LPSIIFADEPTGALDSKSTQDLLKRLTRMNEAFKSTIIMVTHDPVAASYANRVVMLKDGQIFTELYQGDDDKHTFFKEII
RVQSVLGGVNYDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vraF YP_001574583.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-33 41
vraF YP_001574583.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-33 41