Gene Information

Name : hsdR1 (USA300HOU_0033)
Accession : YP_001573957.1
Strain : Staphylococcus aureus TCH1516
Genome accession: NC_010079
Putative virulence/resistance : Unknown
Product : type I site-specific deoxyribonuclease restriction subunit
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.21.3
Position : 42143 - 42451 bp
Length : 309 bp
Strand : +
Note : -

DNA sequence :
ATGATTCAATGCCTAAACCTAATCGAAACAAGCGTATTGTTGCGTATATTGTATGTAGTATATCGAGCTTCACATGAAAC
AGCTAAAGAAGCTTTGGGCGATAAAGAGTTAAGAGCCATTGCACATGAGTTAACTAAAACAGTTAAGGATAACATGAGTG
TTGATTGGTCTAAACGAGACAGTGCTAAAGCTAAAATGAGAGTTCAAGTTAGACGCCTATTAAAGAAATATGGCTATCCA
CCAGATCTTCAAAAAATGGCTGTGGAACAAGTTGTAGAGCAAGCAGAATTAATGGCAAGTCAGCAATAA

Protein sequence :
MIQCLNLIETSVLLRILYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKKYGYP
PDLQKMAVEQVVEQAELMASQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAMSHR1132_00340 YP_005324558.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 2e-31 100
unnamed BAA94332.1 hypothetical protein Not tested Type-I SCCmec Protein 7e-43 100
hsdR NP_644848.1 hypothetical protein Not tested Type-IV SCCmec Protein 1e-42 100
SACOL0035 YP_184946.1 hypothetical protein Not tested Type-I SCCmec Protein 1e-34 99