Gene Information

Name : capB (USA300HOU_2663)
Accession : YP_001576528.1
Strain : Staphylococcus aureus TCH1516
Genome accession: NC_010079
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein CapB
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 2823814 - 2824506 bp
Length : 693 bp
Strand : -
Note : possible ATP-binding protein

DNA sequence : 
ATGACGAATACACGAAGAAGTACATCAAGTTTAATTGTCCATGAACAACCAAAGTCACCTATTAGCGAGAAATTTCGAGG
CATAAGATCAAATATTATGTTTGCAAATCCTGACAGTGCAGTTCAAAGCATTGTAATCACTTCAGAGGCACCAGGCGCAG
GTAAGTCTACAATTGCAGCAAATTTAGCAGTTGCATATGCGCAAGCAGGTTATAAAACACTAATCGTAGACGGGGATATG
CGTAAACCTACGCAGCATTATATTTTTAATTTGCCAAACAATGAAGGCCTATCAAGTTTATTGCTAAATTGGTCAACTTA
TCAAGACAGTATTATCTCAACTGAAATTCAAGATTTAGACGTCTTGACGTCTGGGCCAATCCCACCGAATCCGTCAGAGT
TAATTACATCAAGGGCATTTGCAAATTTGTATGACACATTATTGATGAATTATAACTTTGTAATTATCGATACGCCACCA
GTGAACACAGTTACAGATGCGCAATTATTTTCAAAGTTTACCGGCAATGTTGTCTACGTAGTTAATTCGGAAAATAATAA
TAGAGATGAAGTTAAAAAAGGAAAAGAACTTATTGAAGCAACAGGTGCTAAATTATTAGGTGTAGTCTTAAATAGAATGC
CTAAAGATAAAAGTGCTAGTTACTATGCATATTATGGGACTGATGAATCATGA

Protein sequence : 
MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM
RKPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPP
VNTVTDAQLFSKFTGNVVYVVNSENNNRDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-67 60
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 4e-58 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capB YP_001576528.1 capsular polysaccharide biosynthesis protein CapB VFG1298 Protein 4e-62 57