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Name : USA300HOU_2174 (USA300HOU_2174) Accession : - Strain : Staphylococcus aureus TCH1516 Genome accession: NC_010079 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 2317803 - 2319427 bp Length : 1625 bp Strand : + Note : frameshift of transpose; possible IS1272 transposase DNA sequence : ATGTATAAAAATTATAACTTGATCCAACTTACACTACCAATAGAAACTTCTGTTAGAATTCCTCAAATTGATATTTCGCG ATATGTTAATGAAATTGTTGAAACGATACCTGATAGCGAATTCGATAAATTCAGACATCATCGTGGCGCAACATCCTATC ATCCAAAAATGATGTTAAAAATCACCTTATATGCATATACTCAATCTGTATTTTCTGGTCGTAGAATAGAGAAATTACTT CATGACAGTATTCGAATGATGTGGTTAGCTCAAAATCAAACACCTTCTTATAAAACTATTAATCGTATTAGAGTGAATCC TAATACTGATGCGTTAATTGAATCTTTATTTATCCAGTTTCATAGTCAATGTTTAAAGCAAAATCTTATTGATGGTACAA AAGTAGAAGCTAATGCCAATAGGTATACATTTGTGTGGAAGAAAAGTATTCAAAATCACGAATCGAAATTGAACGAAAAT TCAAAAACATTATATCGTGACTTAGTTGAAGAAAAAATAATACCAGAGATAAAAGAAGATGGAGATAGCGATTTAACAAT AGAAGAAATAGATTTAATTGGTAGTCATTTAGATAAAGAAATCGAAGGTTTAAATCATTCTATTGAGAACGAAGATAGTA CTCAAATTAGAAAACAGACCCGTAAAAAAGAACTAAGATTAAGAAGTTCAAAAATAAATTTGATGATTATTCCGAAAGAA AAAATAAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGCTTTTCTAAAACTGATCATGATGCAACTTTTATG AGAATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGGATACAATTTACAAATAGCGACAAATTCTCAATTTGT TTTATCCTATGACCTATTTCAAAACCCAACAGATACTAGAACTTTAATTCCATTTTTAACAATGATTCAAAATACCTTCG GTTATTTACCGGAGTATATTGTAGCTGATGCAGGTTATGGTAGTGAGCAAAACTATATGGCTATTATAGATGATTTTAAT AAAACGCCACTTATTACGTATGGCATGTTTATTAAAGATAAAACTAGAAAGTTTAAAAGTGACATTTTCAACACTTAAAA TTGGAAATATGACGAACTTAATGATGAATTTATATGTCCTAATAACAAAAGAATAGGTTTTAAAAGATATGCATACCGTA ATGATAGATATGGTTTTAAACGAGACTTCAAACTATATGAATGTGATGACTGTTCATCATGTTCTTTGAGACATCAATGC ATGAAACCAAATTCGAAATCCAATAAGAAAATCATGAAGAATTATAATTGGGAATACTTTAAAGTCCAAATTAATCAAAA GCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCAAAGAAAAATTGATGTAGAGCCTGTTTTTGGATTTATGAAGGCTA TTTTGGGTTTCACTCGAATGTCAGTTCGAGGAATAAATAAAGTTAAACGAGAGCTAGGTTTTGTATTAATGGCACTTAAT ATAAGGAAAATAGCAGCTCAACGAGCTGTACATTATAAAATACATATCAAAAAAGCTGATTTCTATCAAATAATTAATAG AAATCAGCTTTTTTACATTGCCTAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | DNA | e-246 | 85.1 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | DNA | e-246 | 84.7 |
| unnamed | - | - | Not tested | Type-I SCCmec | DNA | e-246 | 84.6 |
| unnamed | - | hypothetical protein | Not tested | Type-IVa SCCmec | DNA | e-246 | 84.5 |
| unnamed | - | - | Not tested | Type-IVa SCCmec | DNA | e-246 | 84.5 |
| unnamed | - | - | Not tested | Type-IVb SCCmec | DNA | e-246 | 84.5 |
