|
Name : USA300HOU_2014 (USA300HOU_2014) Accession : YP_001575891.1 Strain : Staphylococcus aureus TCH1516 Genome accession: NC_010079 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : 3.4.-.- Position : 2131870 - 2133156 bp Length : 1287 bp Strand : + Note : dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simi DNA sequence : ATGTTTAAGAATAAAAATTATGTTTATATAAATATATATACTACTTTGAAAGGTGTGAGCTTAATGACAACTTTTAGTGA AAAAGAAAAAATTCAATTACTAGCAGATATTGTTGAACTACAAACTGAAAATAATAATGAAATAGACGTTTGTAATTATT TAACAGATTTATTCGACAAGTACGATATTAAATCTGAAATTTTGAAAGTTAATGAACACCGCGCCAATATCGTTGCAGAA ATCGGTAACGGCTCACCTATACTCGCATTGAGTGGTCATATGGATGTTGTTGATGCAGGAAATCAAGATAATTGGTCATA TCCCCCTTTTCAACTGACAGAAAAAGATGGCAAATTATATGGCCGAGGCACTACAGATATGAAAGGCGGTTTAATGGCTT TGGTCGTATCTCTAATCGAATTAAAAGAACAAAATGAATTGCCTCATGGAACGATTAGATTACTGGCTACTGCTGGCGAA GAGAAAGAACAAGAAGGTGCCAAATTATTAGCTGATAAAGGCTATTTAGACGATGTCGATAGCTTAATTATTGCTGAACC AACTGGATCTGGAATTTATTATGCACATAAGGGGTCTATGTCATGTAAAGTAACTGCAACTGGTAAAGCTGTCCATAGCT CAGTTCCATTTATTGGTGACAATGCAATTGATACACTGCTTGAATTTTATAATCTATTTAAAGAAAAATATTCAGAGCTT AAACAACAAGATACTAAACATGAATTAGATGTTGCGCCTATGTTCAAATCATTGATTGGAAAAGAAATTTCTGAAGAGGA TGCAAATTATGCATCTGGTCTTACAGCTGTATGTTCGATTATAAATGGCGGCAAACAATTTAACTCTGTACCAGATGAAG CTTCACTTGAATTTAACGTAAGACCAGTTCCTGAGTATGATAACGACTTTATAGAATCGTTTTTCCAAAATATCATTAAT GATGTGGATAGCAATAAGCTTTCACTCGATATTCCAAGCAATCACCGACCTGTAACAAGCGATAAAAATAGCAAATTAAT TACTACGATTAAAGATGTAGCTTCTAGTTATGTAGAACAAGACGAAATATTTGTTTCAGCGCTTGTAGGTGCAACAGATG CCTCTAGTTTCTTAGGAGATAATAAGGACAATGTTGATTTAGCCATTTTTGGACCAGGTAATCCATTAATGGCACATCAA ATCGATGAATATATTGAAAAAGATATGTATCTGAAATATATTGATATTTTTAAAGAGGCTTCCATTCAATATTTAAAAGA AAAATAA Protein sequence : MFKNKNYVYINIYTTLKGVSLMTTFSEKEKIQLLADIVELQTENNNEIDVCNYLTDLFDKYDIKSEILKVNEHRANIVAE IGNGSPILALSGHMDVVDAGNQDNWSYPPFQLTEKDGKLYGRGTTDMKGGLMALVVSLIELKEQNELPHGTIRLLATAGE EKEQEGAKLLADKGYLDDVDSLIIAEPTGSGIYYAHKGSMSCKVTATGKAVHSSVPFIGDNAIDTLLEFYNLFKEKYSEL KQQDTKHELDVAPMFKSLIGKEISEEDANYASGLTAVCSIINGGKQFNSVPDEASLEFNVRPVPEYDNDFIESFFQNIIN DVDSNKLSLDIPSNHRPVTSDKNSKLITTIKDVASSYVEQDEIFVSALVGATDASSFLGDNKDNVDLAIFGPGNPLMAHQ IDEYIEKDMYLKYIDIFKEASIQYLKEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 4e-64 | 43 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 9e-64 | 43 |
