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Name : USA300HOU_1855 (USA300HOU_1855) Accession : YP_001575737.1 Strain : Staphylococcus aureus TCH1516 Genome accession: NC_010079 Putative virulence/resistance : Unknown Product : IS1181 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3464 EC number : - Position : 1994386 - 1995747 bp Length : 1362 bp Strand : + Note : - DNA sequence : ATGTGTAATGATACCTTAGAATTACTAAGAATAAAAGATGAAAATATAAAATATATAAACCAAGAAATTGACGTCATTAT CAAAGGAAAAAAAGCAACAGTGGTTAATGCTGTACTAACGTATAAGCCTTCGGCCTGTTATTGTTGTGGAGTTAAAAATG AAGGACAAATTCATAAACATGGTAAGCGTGTTTCTCGTATTACTTTACTTAAAACTCAAGGGTATAACACATACCTCAAC TTAGCTAAACAACGTTTTAAATGCTTAGAATGCAATGGCACTTTTACTGCTAAAACGTCAATTGTTGATGAGTCGTGTTT TATCTCAAGATGTGTTACTCAAAAAGTTATAGAAGAAGCTACTAAAGTTAAAACAGAGATTGATACTGCAGAAGATAACT GTATCTCTCCATCTACTGTAAGTCGTATTAGAACTAAAGCGGCTAATTCATTACGAATTAAACCCTTTAATTGTTTGCCA GAACACATCGCTATGGATGAATTTAAAAGCGTTAAAAATGTAACTGGATCAATGAGTTTCATTTTTATAGATAATGATAC TCATGATGTTATAGATATTTTAGAAAATAGAACTACAAGATTCTTGCGTGCCTATTTCGAGCGATTCGATTTAAAAAATC GACAACAAGTTAAGACGGTTACTATTGACATGTATGAACCCTATGTCCGATTATTTCGCGACCTATTTCCTAATGCAGCT ATTATTTTTGACAGATTCCATATCGTTCAACATTTAAATAGAGAACTTAATAAGTATCGTGTACAAGTTATGAATGAATA CCGTAATAAAAAAGGACCTGATTATACAATTTTTAAGAATAACTGGAAAGTCCTATTGATGGATACTAGTAAAACCATAT TTAGTAAATACAGATGGAATAAATCTTTTAAGGCTTATAAACGCTCATCTGACATTGTAGAATTCATGCTTTCAAAAGAC GATATACTACGACACTCCTACGAACTTGTCCAAGGATTACGAAAAGACCTAAGGTTATGTAATTGGCCTAAATTTATTAA TCGTTTAAATTCAGTTAGTAAAAAGTCTGTGAGTAAGGGTGTATGGAAAGCGGTTAAATATTATAGAAAACATCAAAGGA TGTTAAGAAATACAATTTATTACCCAGCATTTAATAATGGTGCTATAGAAGGAATTAATAATAAGATAAAATTAATCAAG CGAATTTCTTTTGGTTACAGAAATTTCAACAACTTTAAAGCACGTATAATGATGATTTTCAGCTTGTACAAAGGAGAAAA AAGAAGACAACCAAGCCCAATAATGGACTGGCCGCCTAATAATAAAAACTCTAAAAGTTGTATTTTAAAAATAGTTCTTT AA Protein sequence : MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCGVKNEGQIHKHGKRVSRITLLKTQGYNTYLN LAKQRFKCLECNGTFTAKTSIVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANSLRIKPFNCLP EHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTRFLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAA IIFDRFHIVQHLNRELNKYRVQVMNEYRNKKGPDYTIFKNNWKVLLMDTSKTIFSKYRWNKSFKAYKRSSDIVEFMLSKD DILRHSYELVQGLRKDLRLCNWPKFINRLNSVSKKSVSKGVWKAVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK RISFGYRNFNNFKARIMMIFSLYKGEKRRQPSPIMDWPPNNKNSKSCILKIVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | NP_371686.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 0.0 | 99 |
| SA1006 | NP_374278.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 0.0 | 99 |
| SACOL1879 | YP_186706.1 | IS1181 transposase | Not tested | vSa¥â | Protein | 0.0 | 99 |
| tnp | YP_251995.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 2e-78 | 43 |
| tnp | YP_251945.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 2e-78 | 43 |
