Gene Information

Name : SARI_00089 (SARI_00089)
Accession : YP_001569184.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 85904 - 87133 bp
Length : 1230 bp
Strand : +
Note : 'COG: NOG10023 non supervised orthologous group; Psort location: nuclear, score: 23'

DNA sequence :
ATGTTGATTAATAATGCGGGGATCAATCCTGCTACTTATTTAAATAATCATTCTGTTGAGAATACTCCGCAGCCTGGTTC
GCAATCCGTTAGCGTGAAAGATATTCTGAGCAGCATTGGTATTACTGTTAGTAAAGTCAGTGACCTGGGACTAAGTCCGA
CATTGACTGCGCCTGCGCCTGGAGTATTAACGCAAACCCCAGGTACAGTAACTTCCTTTTTGAAAACCAGCATTCAGAAT
GCCGATATGAATCAGGATCTGAATGCCCTGGCTAATAATTTTAGTAACAAAGCGAACGAATTGGTGCAAACCCATCTGCG
GGAGCAACAGGCTGAAGTCGGAAAATTTTTTGATATCAGCGGTATGTCTTCCAATGCTGTTGCGCTATTGGCTGCCGCGA
ATGTTTTAATGCTGACGTTGAACCAGGCAGACACCCAACTGTCCAGTAAATTGTCACTCGTCAGTTTTGACGCCGCAAAA
ACGACGGCAAGCTCCATGATGCGTGAAGGGATGAATGCGTTGTCCGGTAGTATTTCTCAGAGCGCGCTTCAGATGGGGAT
CACTACCGTGGGCGCGAAACTGGAATATAAAGGGCTGCAGAATGAGAGAGGCGCGCTTAAACATAATGCTGCGAAGATCG
ATAAACTGACTACTGAAAGCCACAGTATTAAAAATGTGCTGAACGGGCAGAATAGTGTCAAGCTCGGTTCAGAAGGCGTC
GATTCTCTGAAATCGTTAAATATGAAGAAAACTGGCGCCGATGCGACGAAAAATCTTAATGACGTGACGCTTAAATCTAA
TGCCGGAACAAGTGCCACAGAAAGCTTGGGCATTAAAGACAGTAATAAACAAATTTCCCCTGAACATCAGGCCATTTTGT
CGAAACGTCTTGAGTCTGTCGAATCCGATATTCGTCTTGAGCAGAATACTATGGATATGACCCGAATCGATGCGCGTAAG
ATGCAGATGACGGGCGATTTGATTATGAAGAACTCGGTCACTGTCGGTGGGATCGCGGGAGCGTCCGGACAGTACGCCGC
CATCCAGGAGCGTTCCGAACAGCAAATTAGCCAGGTGAATAACCGGGTTGCCAGCACGGCATCGGAAGAAACGCGTGAGA
GTTCACGTAAGTCGACCAGCCTGATTCAGGAAATGCTGAAAGCAATGGAAAGCATTAACCAGTCGAAAGCATCCGCATTC
GCCGCTATCGCGGGAAATATTCGCGCTTAA

Protein sequence :
MLINNAGINPATYLNNHSVENTPQPGSQSVSVKDILSSIGITVSKVSDLGLSPTLTAPAPGVLTQTPGTVTSFLKTSIQN
ADMNQDLNALANNFSNKANELVQTHLREQQAEVGKFFDISGMSSNAVALLAAANVLMLTLNQADTQLSSKLSLVSFDAAK
TTASSMMREGMNALSGSISQSALQMGITTVGAKLEYKGLQNERGALKHNAAKIDKLTTESHSIKNVLNGQNSVKLGSEGV
DSLKSLNMKKTGADATKNLNDVTLKSNAGTSATESLGIKDSNKQISPEHQAILSKRLESVESDIRLEQNTMDMTRIDARK
MQMTGDLIMKNSVTVGGIAGASGQYAAIQERSEQQISQVNNRVASTASEETRESSRKSTSLIQEMLKAMESINQSKASAF
AAIAGNIRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sipC YP_217803.1 cell invasion protein Virulence SPI-1 Protein 5e-158 92
sipC NP_461805.1 translocation machinery component Virulence SPI-1 Protein 5e-158 92
sipC NP_457278.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 6e-157 91
sipC NP_806487.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 6e-157 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_00089 YP_001569184.1 hypothetical protein VFG0545 Protein 2e-158 92