|
Name : SARI_00086 (SARI_00086) Accession : YP_001569181.1 Strain : Salmonella enterica RSK2980 Genome accession: NC_010067 Putative virulence/resistance : Virulence Product : surface presentation of antigens protein SpaS Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 82385 - 83455 bp Length : 1071 bp Strand : + Note : Required for surface presentation of invasion plasmid antigens; required for invasion and for secretion of the three ipa proteins DNA sequence : ATGTCCTCGAATAAAACAGAAAAACCTACTAAAAAACGGCTGGAAGATTCCGCTAAAAAGGGTCAGTCATTTAAAAGTAA AGATCTTATTATCGCCTGTTTGACTCTGGGAGGAATTGCTTATCTGGTGTCGTATGGCTCATTTAATGAGTTTATGGGAA TTATTAAGATCATCATTGCAGAAAATTTTGAGCAGAGCATGGCTGACTACAGTCTGGCCGTTTTAGGGGTAGGGTTAAAA TACCTGATTCCATTTATGCTACTCTGCTTAGTGTGTTCCGCATTACCGACGTTATTACAGACGGGTTTTGTGCTGGCGAC AGAGGCATTAAAACTTAATTTGTCGGCATTAAACCCGGTCGAAGGGGCGAAAAAACTTTTCAGTATGCGAACAGTAAAAG ATACGGTCAAAACTTTACTGTATCTCTCATCCTTTGTGGTGGCCGCAATAATTTGCTGGAAAAAATATAAGGTTGAAATC TTTTCTCAGTTAAATGGCAATGTTATGGGAATTGCCGTCATTTGGCGTGAGCTTCTTCTCGCGTTGGTATTAACTTGCCT TGCCTGTGCATTAATTGTTTTATTATTGGATGCTATCGCTGAATACTTCCTGACCATGAAAGATATGAAAATGGATAAAG AAGAAGTGAAGCGTGAGATGAAGGAGCAGGAAGGGAACCCGGAGGTTAAATCTAAAAGACGTGAAGTTCATATGGAAATT CTGTCTGAACAGGTGAAATCTGATATTGAAAACTCACGTTTGATTGTTGCCAACCCAACGCATATTACGATCGGTATTTA TTTTAAACCTGAACTGATGCCGTTTCCGATGATCTCAGTGTATGAAACTAATCAGCGCGCACTGGCCGTTCGCTCCTATG CGGAGAAGGTTGGCGTACCTGTTATCGTCGATATCAAACTGGCGCGCAGTCTTTTCAAAACCCATCGCCGTTATGATTTG GTGAGTCTGGAAGAAATTGATGAAGTTTTACGTCTTCTGGTTTGGCTGGAAGAGGTAGAAAACGCGGGCAAAGATGTTAT TCAGCCACAAGAAAACGAGGTACGGCATTGA Protein sequence : MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIAENFEQSMADYSLAVLGVGLK YLIPFMLLCLVCSALPTLLQTGFVLATEALKLNLSALNPVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEI FSQLNGNVMGIAVIWRELLLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPFPMISVYETNQRALAVRSYAEKVGVPVIVDIKLARSLFKTHRRYDL VSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaS | YP_217806.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 6e-129 | 97 |
| spaS | NP_457281.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 5e-130 | 97 |
| spaS | NP_806490.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 5e-130 | 97 |
| spaS | NP_461808.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 3e-130 | 97 |
| spaS | AAS66868.1 | SpaS | Not tested | SSR-2 | Protein | 3e-68 | 56 |
| ECs3721 | NP_311748.1 | surface presentation of antigens protein SpaS | Not tested | LIM | Protein | 9e-60 | 53 |
| ysaU | AAS66849.1 | YsaU | Not tested | SSR-1 | Protein | 2e-44 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SARI_00086 | YP_001569181.1 | surface presentation of antigens protein SpaS | VFG0548 | Protein | 1e-130 | 97 |
| SARI_00086 | YP_001569181.1 | surface presentation of antigens protein SpaS | VFG1015 | Protein | 1e-52 | 50 |
| SARI_00086 | YP_001569181.1 | surface presentation of antigens protein SpaS | VFG2452 | Protein | 7e-49 | 45 |
