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Name : SARI_00875 (SARI_00875) Accession : YP_001569936.1 Strain : Salmonella enterica RSK2980 Genome accession: NC_010067 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 887865 - 890792 bp Length : 2928 bp Strand : + Note : 'COG: COG3209 Rhs family protein; Psort location: nuclear, score: 23' DNA sequence : ATGAGTACATCTGATTATAGTAAAACTCCGACGATCACGACATATGATAACCGTCATTTGGCCGTACGTACCCTTGAGTG GTGTCGCCATCCGGACACGCCGCAGACGACGGAGATCCGCCCCACCTACTGTCAGTATGATGCACGTGGTTTTTTATCAC AGAGCGCAGATCCCCGACTGGCGGCTGCCGGACTGAATAATTTTACTTGTGATTACGACCTGGGGGGCAGAGTGCTGCGT ACCTGCAGCGCTGATGCCGGGACGTCCCTGGCGCTGAGTGATGCTGCCGGACGCACTGTACTGGGAATGAGTGGTCTGGT GGTGACGGCGTCAGGCAGCACAGATATGAGCAGAGCGGTGACTACCCGACGGCAATACGAGGACCGCAGTCTGCCGGGAC GTCTGCTCAGCGTGGTTGAGCAGGCCAGCGGCAAGACGGGTCGGGTGACGGAGCGGCTGATCTGGTCGGAAAGTAGCGCG AAGGCAAGCGCGAACAACCTGGTAGGGACGTGCATCAGGCACTACGACCCGTCAGGATGCGTCGAGATTGGCAGTATAGC GCTAAGCGGGTTGGCGCTCTCGGTAACGCGGTGGCTGATGACGGATGATGAGGTGCAGGCTGACTGGCAGGGGGATGACC GCAGGGGGTGGGATGCACAACTGGACGACGTACCCTATGCTACTCTGAGCCAGGGCGATGCGGCCGGAAGAGTAGTTGGT ATCACCGACGCAGTGGGCAACAAACAGCGGATGGTGCTGGACATAGCAGGAATGTCAACAGGCCGCAGGCTGACGGTGAA CGGAGAGGAGAAGGACATAGTCAGGTCGACTACCCGAAGCGCCGCTGGACAGGTGTTGCAGGAGGAGCATGGCAACGGGG TGGTGGTAAACCGGGAGTACGAGCCACAGACGCAGTGGCTGAAAAGGATAAAAACAGAACGCCCGGCAGGGCATCCGCAG GGGGCAGGAGTGCTTCAGGACCTGCGTTATGAATATGACCCGGTAGGCAACGTGAAATGTGTTCGCAATGACGCAGAAGA AACCCGATTCTGGCGCAACCAGCAAGTGGAGCCGGAGAACCGATACGGTTATGACAGTCTCTACCAGTTGGTTAGCGCCA GCGGGCGGGAAAAGGTTAATATAGGCCAACAGAACCGTTCCTTCTTCCCCGCCGACAGTATCTCCTGTACCCGTTATCTA CGCACCTATACCTACGACAGCGGCAACAACCTGACTCGGATACGGCACAGCGCGTCGGGAAGTGGCAACTGTCACACCAC ATATATAACCGTCAGCGACAGCAGTAACCGGGCCGTATTACGTTCTCTAGCGGCGACGCCGGCAGAGGTGGAAATGCATT TTGGCCCAAGTGGGGAACAACTTCAGCTTCAGCCAGGCCAGGCGCTGGCATGGACAGTGCGTAGGGAGTTGTTACAGGTG ACGCCGGTGGAACGTGAAGGCGCGCAGGACGATTGGGAATACTATCGATACGATGCGAGAAGCCAGCGAGTGGTGAAGGG AAGTCGGCGGCAGACAGGGAGTGGGACGCTGACCCAACGGGTAGTATACCTGCCGGGGCTAGAGCTGCGAACGAAAAGCA GTGGAGAAAGCCTGCAGACAGTGGTATCGGATAACGTGCGGTTATTGCACTGGGAGAGTGGAAAACCGGAGGGGCTTAGT AATGATGGGCTGCGTTACAGCTACGAGAATCTGACAGGAAGCAGTGGGCTGGAGGTGGATGAGGATGGCTGCATCATTAG TGTGGAGGAATACTACCCATACGGGGGAACGTCTGTCTGGAGCGGGAGTAGCGAAACGGAAGCAGACTATAAAACGGTGC GCTATTCAGGCAAAGAGCAGGATGCGACAGGGCTGTATTATTATGGTTATCGGTATTATCAGACGTGGGCGGGAAGGTGG ACTAGCGCAGATCCTGCAGGGACGGCGGACGGCCTGAATATGTACCGCATGTGTCGGAATAATCCGGTGACGTTCAGGGA TAGCAACGGTTTGCTGACGGAAAAGGAAATCCAGATTCTGATGTTCCAGACCAGGCAACATATGAGTCAGACCGGCAAGG ATCTTGAGTCGGTAATGCACAATATCCTGGGATTAAACGGTGATGATGCGGCAGTGATCCGTAGCCGACTGGGAAATACG TTCCCCGAGCCTAGGGCAAGTACATCCGGTATAAATGAAATCACGGCTTTTGAGGAACAAATAGAGGCCATGAGTATGCC AGGGGGTAGTCCCCTTCATATCGATCTTCCCAGCCTCATGCCAGAGAATTTTCAATACCCGCTGTACCCGGACTGTTGTG TAGAATTGCCGCCGTTGACTTCTTCGGATACATCCGATGATGACATGTACGGAGTGGAAAGCCCAGAGATGTCGCTTCCA GAGATTACTCCGGAATTGATGACGTCTCATTTTCCGAATATGTCCGAAGCTGACAGGCAAGCCTTAGAATATATTGCGAA CCCTGAAAACTTTTCCCATACATTATATGCTGATGGCACGGTTGTATCTTTCAGTTATAAACGATTCCCCGGTCGTTTTA CAAATAATTATAAACCAGATACATGGGCATTTCTATGTAACTTTAAATCACAAGAAATTGATAAGGGAGTTTATCCTTAT TTTGCCAGCCATGTCGCGCAATATCAATATTTACTGGCAGCAGTCTCAGGTGGATGGGTAGGACAGATGCCATCAACTTT GATCAGGAAAAATGTCATTAATAAGGATACAATAGCGAACACTGCTGGGTTAAAGGGCGAGCAGTTAATGTCGGCTTTTC TTAATAATACGCCAAATGGGAAATCTACCGCTAAGATTTTGGAGGCTTTTAATCTTAACGCTACGTCAGTTAAAATCAAA AACACTTATGGAGATGTCAATTTTTATGTAAATTTAAAGCGTAAATAA Protein sequence : MSTSDYSKTPTITTYDNRHLAVRTLEWCRHPDTPQTTEIRPTYCQYDARGFLSQSADPRLAAAGLNNFTCDYDLGGRVLR TCSADAGTSLALSDAAGRTVLGMSGLVVTASGSTDMSRAVTTRRQYEDRSLPGRLLSVVEQASGKTGRVTERLIWSESSA KASANNLVGTCIRHYDPSGCVEIGSIALSGLALSVTRWLMTDDEVQADWQGDDRRGWDAQLDDVPYATLSQGDAAGRVVG ITDAVGNKQRMVLDIAGMSTGRRLTVNGEEKDIVRSTTRSAAGQVLQEEHGNGVVVNREYEPQTQWLKRIKTERPAGHPQ GAGVLQDLRYEYDPVGNVKCVRNDAEETRFWRNQQVEPENRYGYDSLYQLVSASGREKVNIGQQNRSFFPADSISCTRYL RTYTYDSGNNLTRIRHSASGSGNCHTTYITVSDSSNRAVLRSLAATPAEVEMHFGPSGEQLQLQPGQALAWTVRRELLQV TPVEREGAQDDWEYYRYDARSQRVVKGSRRQTGSGTLTQRVVYLPGLELRTKSSGESLQTVVSDNVRLLHWESGKPEGLS NDGLRYSYENLTGSSGLEVDEDGCIISVEEYYPYGGTSVWSGSSETEADYKTVRYSGKEQDATGLYYYGYRYYQTWAGRW TSADPAGTADGLNMYRMCRNNPVTFRDSNGLLTEKEIQILMFQTRQHMSQTGKDLESVMHNILGLNGDDAAVIRSRLGNT FPEPRASTSGINEITAFEEQIEAMSMPGGSPLHIDLPSLMPENFQYPLYPDCCVELPPLTSSDTSDDDMYGVESPEMSLP EITPELMTSHFPNMSEADRQALEYIANPENFSHTLYADGTVVSFSYKRFPGRFTNNYKPDTWAFLCNFKSQEIDKGVYPY FASHVAQYQYLLAAVSGGWVGQMPSTLIRKNVINKDTIANTAGLKGEQLMSAFLNNTPNGKSTAKILEAFNLNATSVKIK NTYGDVNFYVNLKRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 2e-145 | 52 |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 5e-145 | 51 |
| TccC2 | AAL18492.2 | TccC2 | Virulence | tcd island | Protein | 5e-145 | 50 |
| TccC5 | AAO17210.1 | TccC5 | Virulence | tcd island | Protein | 1e-136 | 50 |
| tccC | CAI77380.1 | putative insecticidal toxin complex protein | Not tested | tc-PAIYe | Protein | 7e-103 | 44 |
