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Name : SARI_00077 (SARI_00077) Accession : YP_001569172.1 Strain : Salmonella enterica RSK2980 Genome accession: NC_010067 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 74594 - 76591 bp Length : 1998 bp Strand : + Note : 'COG: COG4789 Type III secretory pathway, component EscV; Psort location: plasma membrane, score: 23' DNA sequence : ATGGTGATGATCATTTCTATGTTCGTCATTCCATTACCTACCTATCTGGTTGATTTCCTGATCGCGCTGAATATCGTACT GGCGATATTGGTGTTTATGGGGTCGTTCTATATTGACAGAATCCTCAGTTTTTCAACGTTTCCTGCGGTATTGTTAATAA CAACACTCTTTCGTCTGGCATTATCGATCAGTACCAGCCGTCTTATCTTGATCGAGGCCGATGCCGGGGAAATTATCGCC ACGTTCGGGCAATTTGTTATTGGCGATAGCCTGGCGGTGGGTTTTGTTGTCTTCTCTATTGTCACTGTGGTTCAGTTTAT CGTTATTACCAAAGGTTCAGAACGCGTCGCGGAAGTCGCGGCACGTTTTTCTCTGGATGGTATGCCCGGTAAACAAATGA GTATAGATGCCGATTTGAAGGCCGGTATTATTGATGCGGATGCCGCACGCGAACGGCGAAGCGTACTGGAAAGGGAAAGT CAGCTTTACGGTTCCTTTGACGGTGCGATGAAGTTTATCAAAGGTGACGCCATTGCCGGTATCATTATCATCTTTGTGAA CTTTATTGGCGGTATTTCGGTGGGGATGACCCGCCATGGGATGGATTTATCCTCCGCTCTGTCTACTTATACTATGCTGA CCATCGGCGATGGTCTTGTCGCCCAGATCCCTGCACTGTTAATTGCGATTAGTGCCGGTTTTATCGTGACTCGCGTAAAT GGCGATAGCGATAATATGGGCCGGAATATTATGACGCAACTGTTGAACAACCCATTTGTTTTGGTTGTTACGGCTATTCT GACCATTTCAATGGGAACCCTGCCAGGATTTCCGCTGCCGGTTTTTGTCATTCTGTCGGTGGTTTTAAGCGTACTCTTCT ATTTTAAATTCCGTGAAGCAAAACGTAGCGCAGGCACGCCTAAAACCAGCAAAGGCGAGCAGCCGCTCAGTATTGAGGAA AAGGAAGGGACGTCGTTAGGACTGATTGGCGATCTCGATAAAGTTTCTACAGAGACCGTACCACTGATATTACTTGTGCC GAAGAGTCGACGTGAAGATCTGGAAAAAGCACAGCTTGCGGATCGTCTACGCAGTCAGTTCTTTATTGACTATGGTGTGC GCCTGCCGGAAGTATTGTTACGCGATGGTGAGGGGCTGGACGATAACAGCATTGTATTGTTGATTAATGAGATCCGTGTT GAACAATTTACGGTCTATTTTGATTTGATGCGAGTGGTAAATTATTCGGATGAAGTCGTTTCCTTTGGCATTAATCCAAC TACCCATCAGCAAGGTAGCAGTCAGTATTTCTGGGTGACGCATGAAGAAGGGGAAAAGCTTCGTGAGCTTGGTTATGTGC TGCGGAACGCGCTTGACGAGCTCTACCACTGTCTGGCGGTGACACTGGCGCGCAACGTCAATGAATATTTCGGTATTCAG GAAACAAAACATATGCTGGATCAGTTGGAGGCAAAATTTCCTGATTTACTTAAAGAAGTGCTCAGACATGCTACCGTGCA ACGTATATCGGAAGTTTTGCAGCGCCTGTTAAGTGAACGTGTTTCCGTGCGTAATATGAAATTAATTATGGAAGCGCTCG CATTATGGGCGCCAAGAGAAAAAGACGTCATTAACCTGGTGGAACATATTCGTGGAGCTATGGCGCGTTATATCTGCCAT AAATTCGCCAATGGTGGTGAATTACGAGCAGTAATGGTATCTGCTGAAGTTGAGGATGTTATTCGCAAAGGGATCCGTCA GACCTCTGGCAGTACCTTCCTCAGCCTTGAACCGGAAGCCTCCGCTAATTTGATGGATCTCATTACACTTAAGCTGGATG ATTTATTGATTGCACATAAAGACCTTGTCCTCCTTACGTCTGTCGATGTCCGTCGATTTATTAAGAAAATGATTGAAGGT CGTTTTCCTGATCTGGAGGTTTTATCTTTCGGTGAGATAGCAGATAGCAAGTCAGTGAATGTCATAAAAACAATATAA Protein sequence : MVMIISMFVIPLPTYLVDFLIALNIVLAILVFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLILIEADAGEIIA TFGQFVIGDSLAVGFVVFSIVTVVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLKAGIIDADAARERRSVLERES QLYGSFDGAMKFIKGDAIAGIIIIFVNFIGGISVGMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVN GDSDNMGRNIMTQLLNNPFVLVVTAILTISMGTLPGFPLPVFVILSVVLSVLFYFKFREAKRSAGTPKTSKGEQPLSIEE KEGTSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLADRLRSQFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRV EQFTVYFDLMRVVNYSDEVVSFGINPTTHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQ ETKHMLDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVINLVEHIRGAMARYICH KFANGGELRAVMVSAEVEDVIRKGIRQTSGSTFLSLEPEASANLMDLITLKLDDLLIAHKDLVLLTSVDVRRFIKKMIEG RFPDLEVLSFGEIADSKSVNVIKTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| invA | YP_217815.1 | invasion protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| invA | NP_457290.1 | possible secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 0.0 | 99 |
| invA | NP_806499.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| invA | NP_461817.1 | needle complex export protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| ECs3731 | NP_311758.1 | EivA | Not tested | LIM | Protein | 0.0 | 65 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 1e-165 | 64 |
| ysaV | AAS66840.1 | YsaV | Not tested | SSR-1 | Protein | 7e-146 | 55 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 1e-88 | 41 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 2e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SARI_00077 | YP_001569172.1 | hypothetical protein | VFG0557 | Protein | 0.0 | 99 |
| SARI_00077 | YP_001569172.1 | hypothetical protein | VFG1006 | Protein | 1e-174 | 65 |
| SARI_00077 | YP_001569172.1 | hypothetical protein | VFG2461 | Protein | 4e-149 | 57 |
| SARI_00077 | YP_001569172.1 | hypothetical protein | VFG1780 | Protein | 2e-147 | 53 |
| SARI_00077 | YP_001569172.1 | hypothetical protein | VFG0064 | Protein | 6e-99 | 44 |
| SARI_00077 | YP_001569172.1 | hypothetical protein | VFG0384 | Protein | 6e-101 | 43 |
| SARI_00077 | YP_001569172.1 | hypothetical protein | VFG0198 | Protein | 8e-94 | 42 |
