Gene Information

Name : SARI_04453 (SARI_04453)
Accession : YP_001573369.2
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4366853 - 4367512 bp
Length : 660 bp
Strand : -
Note : response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes

DNA sequence : 
ATGCGAATTTTACTGATAGAAGATGACACACTTATTGGCGATGGCATAAAAGCGGGTCTGAGTAAAATGGGTTTCAGCGT
CGACTGGTTTACTGAGGGACGTCCGGGCAAAGAGGCGCTTTACAGCGCGCCTTATGATGCGGTCATTTTAGATTTGACGC
TGCCAGGAATGGACGGACGGGATATTTTGCGCGAATGGCGTGAAAAGGGTAAACAAGAACCGGTACTGATCCTGACGGCG
CGCGACGCGTTAGCAGAGCGCGTTGAGGGGCTACGTCTGGGCGCCGATGACTATTTATGTAAACCTTTTGCGCTCATTGA
GGTTGCTGCCCGTCTGGAGGCGCTGGTACGCCGCGCCAGCGGCCAGGCCAGTAGCGAATTGCGCCACGGTCAGGTTACGC
TCAATCCCGGCAATCTCGTCGCGACGCTTGCCGACGCTCCTTTAGCCCTAAAACCGAAAGAGTTCGCGTTGCTGGAACTG
TTAATGCGCAACAAAGGCCGCGTGCTGCCGCGCAAGCTTATTGAAGAGAAGCTGTATAACTGGGACGATGACGTTTCCAG
CAATGCGGTGGAAGTCCATGTTCATCATTTACGCCGCAAGCTCGGCAGCGAATTTATTCGCACCGTACACGGCATCGGCT
ACACCTTGGGTGACGCATGA

Protein sequence : 
MRILLIEDDTLIGDGIKAGLSKMGFSVDWFTEGRPGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGKQEPVLILTA
RDALAERVEGLRLGADDYLCKPFALIEVAARLEALVRRASGQASSELRHGQVTLNPGNLVATLADAPLALKPKEFALLEL
LMRNKGRVLPRKLIEEKLYNWDDDVSSNAVEVHVHHLRRKLGSEFIRTVHGIGYTLGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-33 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_04453 YP_001573369.2 DNA-binding transcriptional regulator QseB BAC0487 Protein 8e-35 45
SARI_04453 YP_001573369.2 DNA-binding transcriptional regulator QseB NC_002516.2.879194.p Protein 7e-24 41
SARI_04453 YP_001573369.2 DNA-binding transcriptional regulator QseB BAC0083 Protein 4e-30 41
SARI_04453 YP_001573369.2 DNA-binding transcriptional regulator QseB BAC0638 Protein 2e-25 41
SARI_04453 YP_001573369.2 DNA-binding transcriptional regulator QseB BAC0308 Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_04453 YP_001573369.2 DNA-binding transcriptional regulator QseB VFG0473 Protein 2e-34 46
SARI_04453 YP_001573369.2 DNA-binding transcriptional regulator QseB VFG1390 Protein 1e-26 41