Gene Information

Name : SARI_00042 (SARI_00042)
Accession : YP_001569137.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 43341 - 45923 bp
Length : 2583 bp
Strand : -
Note : This protein performs the mismatch recognition step during the DNA repair process

DNA sequence :
ATGAGTAAAATCAATATGAATGAAGACATTGATAAGGACTTCTCTAGCCATACCCCGATGATGCAGCAGTATCTCAAGCT
GAAGGCCCAGCATCCGGAGATCCTGCTGTTTTATCGTATGGGCGACTTTTACGAGCTGTTTTATGACGACGCAAAGCGTG
CGTCGCAGTTGCTCGATATTTCGCTGACCAAACGCGGCGCATCGGCTGGCGAACCTATCCCCATGGCGGGTATCCCGCAC
CACGCCGTAGAAAACTATCTCGCAAAACTGGTCAATCAGGGCGAATCCGTCGCTATTTGCGAACAGATTGGCGACCCGGC
CACCAGCAAAGGCCCCGTTGAACGTAAGGTCGTGCGTATCGTTACGCCTGGCACCATCAGCGATGAAGCCCTGTTACAGG
AACGTCAGGATAACCTGCTGGCGGCTATCTGGCAGGATGGTAAAGGCTACGGCTACGCCACGCTGGATATCAGCTCCGGG
CGCTTTCGTCTGAGCGAGCCCGCCGACCGTGAAACCATGGCAGCAGAGTTGCAACGCACGAATCCTGCCGAATTATTGTA
TGCCGAAGATTTTGCTGAAATGGCGTTGATAGAGGGACGTCGGGGCTTACGCCGCCGTCCGCTGTGGGAGTTTGAGATTG
ATACCGCCCGTCAGCAGCTAAATTTACAATTCGGTACGCGGGATCTGGTCGGCTTCGGCGTCGAAAATGCCTCGCGTGGA
TTATGTGCGGCGGGCTGCCTGTTACAGTACGTAAAAGATACGCAGCGCACCTCCCTGCCGCATATTCGCTCCATTACGAT
GGAACGCCAGCAGGACAGCATCATTATGGATGCCGCGACCCGCCGCAATCTGGAAATTACCCAGAACCTGGCCGGCGGTA
TCGAAAATACCCTCGCTGCGGTGCTTGATTGTACCGTGACGCCAATGGGTAGCCGAATGCTTAAACGCTGGCTGCACATG
CCGATAAGAAATACCGACATATTGCGTGAACGCCAGCAGACCATCGGCGCCTTGCAGGACACCGTCAGCGAGCTGCAACC
CGTGCTGCGTCAGGTCGGCGATCTGGAGCGCATTCTTGCCCGTCTGGCGCTACGCACCGCGCGTCCGCGCGACCTCGCCC
GAATGCGTCACGCCTTCCAGCAACTGCCGGAATTGCACGCTCAGCTTGAAACCGTTGACAGCGCGCCGGTGCAGGCGTTG
CGTAAAAAAATGGGCGATTTTGCCGAACTACGCGACCTCCTGGAACGCGCCATTATTGACGCGCCGCCGGTACTGGTCCG
CGACGGCGGCGTTATTGCCCCCGGCTATCACCAGGAGCTGGATGAATGGCGCGCGCTGGCGGACGGCGCCACCGACTACC
TCGATCGTCTGGAAATTCGCGAGCGCGAGCGTACCGGACTGGATACGCTGAAAGTCGGCTATAACGCGGTACATGGCTAT
TACATTCAGATTAGCCGTGGTCAAAGCCATCTGGCGCCAATCAATTATGTGCGTCGCCAGACGCTGAAAAATGCCGAACG
CTACATTATTCCTGAGCTGAAAGAGTACGAAGATAAAGTTCTGACCTCTAAAGGCAAAGCTCTGGCGCTGGAAAAACAGC
TTTACGACGAATTATTTGATTTGTTGTTGCCGCATCTGGCGGATTTGCAGCAGAGCGCAAGCGCGCTGGCGGAACTGGAT
GTGCTGGTTAATCTGGCTGAACGCGCTTATACGCTGAATTACACCTGTCCGACGTTTACCGATAAACCCGGTATTCGTAT
CATCGAAGGTCGCCACCCTGTGGTGGAGCAGGTTCTGAATGAGCCGTTTATCGCTAACCCGCTTAATCTGTCGCCGCAAC
GCCGTATGTTGATCATCACTGGCCCTAATATGGGCGGTAAAAGTACCTATATGCGACAAACGGCATTGATCGCGCTGCTG
GCCTGGATTGGCAGTTACGTGCCGGCGCAAAATGTGGAAATCGGCCCGATCGACCGTATTTTTACCCGCGTCGGCGCAGC
GGACGACCTGGCCTCCGGACGCTCAACCTTTATGGTGGAGATGACCGAAACCGCGAACATTCTGCATAACGCCACAGAAA
ACAGCTTGGTATTGATGGATGAAATCGGACGCGGCACCTCCACGTATGACGGGTTGTCGCTGGCCTGGGCCTGCGCGGAG
AACCTCGCCAATAAGATTAAAGCGTTAACGCTTTTCGCCACCCACTACTTTGAGCTGACTCAGTTGCCGGAGAAAATGGA
AGGCGTAGCGAACGTCCACCTGGATGCGCTGGAACACGGCGATACCATCGCTTTTATGCACAGCGTGCAGGACGGCGCGG
CAAGCAAGAGTTACGGCCTGGCGGTCGCGGCGCTTGCGGGCGTCCCTAAAGAGGTGATCAAACGCGCGCGCCAAAAACTC
CGCGAGCTGGAGAGCATCTCGCCCAATGCGGCGGCAACGCAGGTGGACGGCACGCAAATGTCGTTGCTTGCCGCTCCGGA
AGAGACATCGCCCGCCGTTGAAGCGCTGGAGAATCTCGATCCGGACTCCCTGACGCCACGCCAGGCGCTGGAGTGGATCT
ATCGGCTGAAAAGTCTGGTGTAA

Protein sequence :
MSKINMNEDIDKDFSSHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPH
HAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDGKGYGYATLDISSG
RFRLSEPADRETMAAELQRTNPAELLYAEDFAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENASRG
LCAAGCLLQYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGIENTLAAVLDCTVTPMGSRMLKRWLHM
PIRNTDILRERQQTIGALQDTVSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELHAQLETVDSAPVQAL
RKKMGDFAELRDLLERAIIDAPPVLVRDGGVIAPGYHQELDEWRALADGATDYLDRLEIRERERTGLDTLKVGYNAVHGY
YIQISRGQSHLAPINYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQSASALAELD
VLVNLAERAYTLNYTCPTFTDKPGIRIIEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALL
AWIGSYVPAQNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAE
NLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKL
RELESISPNAAATQVDGTQMSLLAAPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_00042 YP_001569137.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 99