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Name : SARI_00042 (SARI_00042) Accession : YP_001569137.1 Strain : Salmonella enterica RSK2980 Genome accession: NC_010067 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 43341 - 45923 bp Length : 2583 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGAGTAAAATCAATATGAATGAAGACATTGATAAGGACTTCTCTAGCCATACCCCGATGATGCAGCAGTATCTCAAGCT GAAGGCCCAGCATCCGGAGATCCTGCTGTTTTATCGTATGGGCGACTTTTACGAGCTGTTTTATGACGACGCAAAGCGTG CGTCGCAGTTGCTCGATATTTCGCTGACCAAACGCGGCGCATCGGCTGGCGAACCTATCCCCATGGCGGGTATCCCGCAC CACGCCGTAGAAAACTATCTCGCAAAACTGGTCAATCAGGGCGAATCCGTCGCTATTTGCGAACAGATTGGCGACCCGGC CACCAGCAAAGGCCCCGTTGAACGTAAGGTCGTGCGTATCGTTACGCCTGGCACCATCAGCGATGAAGCCCTGTTACAGG AACGTCAGGATAACCTGCTGGCGGCTATCTGGCAGGATGGTAAAGGCTACGGCTACGCCACGCTGGATATCAGCTCCGGG CGCTTTCGTCTGAGCGAGCCCGCCGACCGTGAAACCATGGCAGCAGAGTTGCAACGCACGAATCCTGCCGAATTATTGTA TGCCGAAGATTTTGCTGAAATGGCGTTGATAGAGGGACGTCGGGGCTTACGCCGCCGTCCGCTGTGGGAGTTTGAGATTG ATACCGCCCGTCAGCAGCTAAATTTACAATTCGGTACGCGGGATCTGGTCGGCTTCGGCGTCGAAAATGCCTCGCGTGGA TTATGTGCGGCGGGCTGCCTGTTACAGTACGTAAAAGATACGCAGCGCACCTCCCTGCCGCATATTCGCTCCATTACGAT GGAACGCCAGCAGGACAGCATCATTATGGATGCCGCGACCCGCCGCAATCTGGAAATTACCCAGAACCTGGCCGGCGGTA TCGAAAATACCCTCGCTGCGGTGCTTGATTGTACCGTGACGCCAATGGGTAGCCGAATGCTTAAACGCTGGCTGCACATG CCGATAAGAAATACCGACATATTGCGTGAACGCCAGCAGACCATCGGCGCCTTGCAGGACACCGTCAGCGAGCTGCAACC CGTGCTGCGTCAGGTCGGCGATCTGGAGCGCATTCTTGCCCGTCTGGCGCTACGCACCGCGCGTCCGCGCGACCTCGCCC GAATGCGTCACGCCTTCCAGCAACTGCCGGAATTGCACGCTCAGCTTGAAACCGTTGACAGCGCGCCGGTGCAGGCGTTG CGTAAAAAAATGGGCGATTTTGCCGAACTACGCGACCTCCTGGAACGCGCCATTATTGACGCGCCGCCGGTACTGGTCCG CGACGGCGGCGTTATTGCCCCCGGCTATCACCAGGAGCTGGATGAATGGCGCGCGCTGGCGGACGGCGCCACCGACTACC TCGATCGTCTGGAAATTCGCGAGCGCGAGCGTACCGGACTGGATACGCTGAAAGTCGGCTATAACGCGGTACATGGCTAT TACATTCAGATTAGCCGTGGTCAAAGCCATCTGGCGCCAATCAATTATGTGCGTCGCCAGACGCTGAAAAATGCCGAACG CTACATTATTCCTGAGCTGAAAGAGTACGAAGATAAAGTTCTGACCTCTAAAGGCAAAGCTCTGGCGCTGGAAAAACAGC TTTACGACGAATTATTTGATTTGTTGTTGCCGCATCTGGCGGATTTGCAGCAGAGCGCAAGCGCGCTGGCGGAACTGGAT GTGCTGGTTAATCTGGCTGAACGCGCTTATACGCTGAATTACACCTGTCCGACGTTTACCGATAAACCCGGTATTCGTAT CATCGAAGGTCGCCACCCTGTGGTGGAGCAGGTTCTGAATGAGCCGTTTATCGCTAACCCGCTTAATCTGTCGCCGCAAC GCCGTATGTTGATCATCACTGGCCCTAATATGGGCGGTAAAAGTACCTATATGCGACAAACGGCATTGATCGCGCTGCTG GCCTGGATTGGCAGTTACGTGCCGGCGCAAAATGTGGAAATCGGCCCGATCGACCGTATTTTTACCCGCGTCGGCGCAGC GGACGACCTGGCCTCCGGACGCTCAACCTTTATGGTGGAGATGACCGAAACCGCGAACATTCTGCATAACGCCACAGAAA ACAGCTTGGTATTGATGGATGAAATCGGACGCGGCACCTCCACGTATGACGGGTTGTCGCTGGCCTGGGCCTGCGCGGAG AACCTCGCCAATAAGATTAAAGCGTTAACGCTTTTCGCCACCCACTACTTTGAGCTGACTCAGTTGCCGGAGAAAATGGA AGGCGTAGCGAACGTCCACCTGGATGCGCTGGAACACGGCGATACCATCGCTTTTATGCACAGCGTGCAGGACGGCGCGG CAAGCAAGAGTTACGGCCTGGCGGTCGCGGCGCTTGCGGGCGTCCCTAAAGAGGTGATCAAACGCGCGCGCCAAAAACTC CGCGAGCTGGAGAGCATCTCGCCCAATGCGGCGGCAACGCAGGTGGACGGCACGCAAATGTCGTTGCTTGCCGCTCCGGA AGAGACATCGCCCGCCGTTGAAGCGCTGGAGAATCTCGATCCGGACTCCCTGACGCCACGCCAGGCGCTGGAGTGGATCT ATCGGCTGAAAAGTCTGGTGTAA Protein sequence : MSKINMNEDIDKDFSSHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPH HAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDGKGYGYATLDISSG RFRLSEPADRETMAAELQRTNPAELLYAEDFAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENASRG LCAAGCLLQYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGIENTLAAVLDCTVTPMGSRMLKRWLHM PIRNTDILRERQQTIGALQDTVSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELHAQLETVDSAPVQAL RKKMGDFAELRDLLERAIIDAPPVLVRDGGVIAPGYHQELDEWRALADGATDYLDRLEIRERERTGLDTLKVGYNAVHGY YIQISRGQSHLAPINYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQSASALAELD VLVNLAERAYTLNYTCPTFTDKPGIRIIEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALL AWIGSYVPAQNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAE NLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKL RELESISPNAAATQVDGTQMSLLAAPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 93 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SARI_00042 | YP_001569137.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 99 |
