Gene Information

Name : SARI_04266 (SARI_04266)
Accession : YP_001573191.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Unknown
Product : putative DNA-binding transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 4191083 - 4191994 bp
Length : 912 bp
Strand : -
Note : 'KEGG: shn:Shewana3_3435 4.3e-09 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: cytoplasmic, score: 23'

DNA sequence :
ATGTCAGTATTCGCCAAAGTGGTCGAGTTTGGCTCTTTTACCGCCGCAGCGAGACAGTTGCAAATGAGTGTGTCGTCCAT
CAGCCAGACTGTAGCAAAACTGGAAGATGAGCTTCAGGTCAAACTGCTCAACCGCAGCACACGCAGCATTGGGCTCACCG
AGGCTGGAAAAATCTATTATCAGGGCTGTCGTCGTATGCTGCATGAAGTGCAGGATGTTCACGAGCAGCTTTACGCTTTT
AATAACACGCCTATCGGTACATTGCGTATCGGCTGTTCTTCAACCATGGCGCAAAATGTGCTGGCCGGGCTTACCGCGAA
ATTATTAAAAGAGTATCCCGGTCTGGCGGTCAATCTGGTGACGGGAATTCCCGCTCCGGATTTAATTGCAGACGGGCTGG
ACGTGGTGATCCGTGTGGGCGCGCTGCAAGATTCCAGCCTGTTTTCCCGTCGACTTGGCGCGATGCCGATGGTTGTGTGC
GCCGCCAAATCCTACCTCGCCCAGTATGGCGCCCCGGAAAAACCCGCCGATCTCAGTAGTCATTCCTGGCTGGAATATAG
CGTACGCCCGGATAATGAGTTTGAACTTATCGCACCGGAAGGAATTTCTACCCGGCTGATACCACAGGGACGGTTCGTCA
CTAACGATCCGATGACGCTTGTACGTTGGCTGACCGCCGGTACCGGGATCGCCTACGTGCCGCTGATGTGGGTGATCGAT
GAGATCAACCGCAGCGAGCTGGAGATCCTGCTGCCTCGCTATCAGTCCGATCCGCGTCCCGTGTACGCCCTGTACACCGA
AAAAGATAAGCTGCCGCTTAAAGTGCAGGTAGTGATTAACGCGTTGACTGACTATTTTGTCGATGTCGCCCACCTGTTTC
AGGGAATGCACGGGCGAGGGAAAGAAAAATAA

Protein sequence :
MSVFAKVVEFGSFTAAARQLQMSVSSISQTVAKLEDELQVKLLNRSTRSIGLTEAGKIYYQGCRRMLHEVQDVHEQLYAF
NNTPIGTLRIGCSSTMAQNVLAGLTAKLLKEYPGLAVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGAMPMVVC
AAKSYLAQYGAPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGTGIAYVPLMWVID
EINRSELEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINALTDYFVDVAHLFQGMHGRGKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcaR1 CAI77370.1 putative lysR-family transcriptional regulator Not tested tc-PAIYe Protein 3e-118 81