Gene Information

Name : SARI_03969 (SARI_03969)
Accession : YP_001572905.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3903106 - 3904674 bp
Length : 1569 bp
Strand : +
Note : 'KEGG: spt:SPA3531 1.2e-277 aldB; aldehyde dehydrogenase B K00138; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: endoplasmic reticulum, score: 9'

DNA sequence :
GTGGAGTACCTTTACAATAAGGAGTTGGTCATGACGAACAATCCCCCTTCAACGCGTATTCAGCCAGGTGAATACGGGTA
CCCACTGAAGTTAAAAGCCCGCTATGACAATTTTATTGGCGGTAACTGGGTTGCGCCCGCCGGGGGCGAATATTACCAAA
ACCTGACGCCAGTGACTGGCCAACCGCTGTGTGAAGTCGCTTCCTCCGGTAAAAAAGACATTGATTTGGCGCTCGACGCC
GCGCATAAGGCGAAAGATAAGTGGGCGCATACGTCAGTACAAGACCGTGCCGCTATCTTGTTTAAGATCGCCGATCGGAT
GGAACAAAACCTCGAACTGTTGGCGACAGCGGAAACCTGGGATAACGGTAAACCGATTCGTGAAACCAGCGCTGCCGACG
TACCGCTGGCGATCGATCACTTCCGCTATTTTGCTTCCTGCATACGTGCTCAGGAGGGCGGAATCAGCGAAGTTGATAGC
GAAACCGTAGCCTATCATTTTCATGAACCGCTTGGCGTCGTGGGGCAGATAATCCCATGGAACTTTCCGTTGTTGATGGC
AAGCTGGAAAATGGCGCCAGCGCTGGCAGCGGGCAACTGCGTGGTGCTTAAACCGGCACGCCTGACGCCGCTTTCCGTTC
TGCTGTTAATGGAAGTCATTGGCGATCTGTTACCGCCGGGCGTCGTCAACGTAGTTAACGGCGCGGGCGGCGAGATTGGC
GAATATCTGGCGACCTCGAAACGTATCGCGAAGGTGGCGTTTACCGGTTCGACGGAAGTGGGTCAACAGATCATGCAGTA
CGCCACACAGAATATTATTCCGGTGACGCTGGAGTTAGGAGGTAAATCGCCAAATATCTTCTTTGCTGACGTAATGGATG
AGGAAGATGCGTTTTTTGATAAAGCGCTGGAGGGGTTTGCCCTGTTTGCCTTTAACCAGGGCGAGGTATGTACCTGTCCA
AGCCGTGCGCTGGTCCAGGAATCCATCTATGAGCGCTTTATGGAGCGCGCTATTCGCCGGGTGGAGAATATCCGCAGCGG
GAACCCGCTGGATAGCGGTACGCAGATGGGGGCACAGGTCTCTCACGGCCAGCTTGAGACTATCCTCAATTATATCGATA
TCGGTAAAAAAGAGGGGGCCGATATTCTGACCGGTGGGCGACGCAAGGAACTGGATGGCGAACTTAAAGAGGGCTATTAC
CTTGAGCCCACTATCCTGTTTGGTAAGAATAACATGCGCGTCTTTCAGGAGGAGATCTTTGGCCCGGTGCTGGCGGTAAC
CACCTTTAAAACAATGGAAGAGGCGCTGGAAATCGCTAACGATACGCAGTATGGCCTCGGCGCAGGCGTCTGGAGCCGTA
ATGGTTCGCTGGCGTATAAAATGGGGCGCGGGATTCAGGCCGGGCGCGTATGGACGAACTGCTATCACGCTTACCCGGCA
CATGCGGCGTTCGGCGGATATAAACAGTCCGGCATTGGCCGTGAGACTCACAAAATGATGCTTGAACATTACCAGCAGAC
CAAATGTCTGCTGGTAAGCTATTCCGATAAGCCGTTGGGACTGTTTTAA

Protein sequence :
MEYLYNKELVMTNNPPSTRIQPGEYGYPLKLKARYDNFIGGNWVAPAGGEYYQNLTPVTGQPLCEVASSGKKDIDLALDA
AHKAKDKWAHTSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDS
ETVAYHFHEPLGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEVIGDLLPPGVVNVVNGAGGEIG
EYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAFNQGEVCTCP
SRALVQESIYERFMERAIRRVENIRSGNPLDSGTQMGAQVSHGQLETILNYIDIGKKEGADILTGGRRKELDGELKEGYY
LEPTILFGKNNMRVFQEEIFGPVLAVTTFKTMEEALEIANDTQYGLGAGVWSRNGSLAYKMGRGIQAGRVWTNCYHAYPA
HAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-140 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-145 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-145 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-145 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-145 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_03969 YP_001572905.1 hypothetical protein VFG0082 Protein 2e-140 64