Gene Information

Name : SARI_03879 (SARI_03879)
Accession : YP_001572815.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 3809157 - 3809375 bp
Length : 219 bp
Strand : -
Note : 'COG: COG3311 Predicted transcriptional regulator; Psort location: cytoplasmic, score: 23'

DNA sequence :
ATGCCGGTTTCAGCCCCGGCTCAGGAACGTTTTTTACGTCTCCCGGAAGTCATTCATCAGTGCGGTCTGTCCCGCTCCAC
GCTCTACGATTTAATCGCCCGCAATGCTTTCCCGGCGCAGGTTTCCCTCGGGGGTAAAAATGTCGCTTGGCTGCAGTCTG
AAATCACGGCGTGGATGGAAGAACGTGTCGCGCACCGCAACCGGAAATACGACGCATGA

Protein sequence :
MPVSAPAQERFLRLPEVIHQCGLSRSTLYDLIARNAFPAQVSLGGKNVAWLQSEITAWMEERVAHRNRKYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 3e-11 51
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 2e-11 48
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 3e-09 46
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-09 46
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 3e-09 46
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 2e-11 45
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 2e-11 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_03879 YP_001572815.1 hypothetical protein VFG1118 Protein 1e-09 46
SARI_03879 YP_001572815.1 hypothetical protein VFG1141 Protein 7e-12 45