Gene Information

Name : SARI_03872 (SARI_03872)
Accession : YP_001572808.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3803774 - 3804289 bp
Length : 516 bp
Strand : +
Note : 'COG: NOG12157 non supervised orthologous group; Psort location: endoplasmic reticulum, score: 9'

DNA sequence :
ATGTTCATAATATCCCCATATCCGAAGGGTAATATCATGAGCAAACGTCGTGGTTTAACGGTAGTCCTGGCGACTTTGGT
TACATTTTTCCTGAGCGCTACGCCTGTACTGGCGAATCCTGGAAACGGCAATGGCGGCGGACATGGTAATAACGCGGCTA
ATCAGGGTAATAATGGTAACGGACATAAAGGAAACGCCAGGCAAAAAACGGAACGCTTTAAAAATGGTGGTAAACCGGAT
CACGTCGAATCGGATATTAGCTACGCTGTCGCCCGGCAACTGGCAGTGAATTTAGGGCTGACGGGTTATCAGTCTTTACC
GCCGGGGATTGCGAAAAATCTGGCGAGAGGAAAGCCGCTGCCGCCAGGCATCGCTAAAAAAAGGGTACCAGCGTCTATGC
TGGGACAATTACCTTATTATCCAGGCTATGAGTGGAAAATCATTGGGGATAACCTGGTGCTGATCGCGCTCAGTACTGCG
GTGGTCACGGCGATTATTAATGGCGTGTTTGATTAA

Protein sequence :
MFIISPYPKGNIMSKRRGLTVVLATLVTFFLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNARQKTERFKNGGKPD
HVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKRVPASMLGQLPYYPGYEWKIIGDNLVLIALSTA
VVTAIINGVFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cigR NP_462661.1 inner membrane protein Virulence SPI-3 Protein 1e-47 94
cigR AAD16958.1 CigR Virulence SPI-3 Protein 9e-48 94
cigR YP_218670.1 inner membrane protein Not tested SPI-3 Protein 3e-46 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_03872 YP_001572808.1 hypothetical protein VFG0573 Protein 4e-48 94