Gene Information

Name : hemC (SARI_03714)
Accession : YP_001572661.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 3647686 - 3648627 bp
Length : 942 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGTTAGACAATGTTTTAAAAATTGCCACACGCCAAAGTCCCCTTGCGCTTTGGCAGGCACATTATGTCAAAGACGCATT
GATGGCAACCCATCCGGGACTGACGGTAGAACTGGTGCCGATGGTCACACGCGGCGATGTGATCCTCGATACTCCCCTGG
CGAAAGTGGGCGGTAAGGGTCTGTTTGTTAAAGAGCTTGAAATCGCGCTGCTGGAAAAGCGCGCCGATATCGCCGTACAC
TCCATGAAAGACGTTCCGGTGGCCTTCCCGGACGGTCTCGGGCTGGTGACGATTTGCGAGCGCGAAGATCCGCGCGACGC
GTTTGTCTCGAATCAATATCACAGTCTGGACGATCTGCCCGCGGGTAGTATCGTCGGGACGTCCAGTCTGCGTCGTCAGT
GCCAACTGGCGGAGCGTCGGCCGGACCTCATTATCCGTTCGTTGCGCGGCAACGTTGGCACACGCCTCGGCAAACTGGAC
AACGGGGACTATGACGCCATTATCCTGGCCGTGGCCGGTCTGAAACGCTTAGGCCTGGCGTCGCGCATTCGTACAGCCTT
GCCGCCCGAAGTTTCGCTTCCTGCCGTAGGCCAGGGCGCGATCGGGATTGAGTGTCGTCTTGACGACGCGCGCACACACG
CACTACTCGCGCCACTGAACCACCCGCAAACCGCGCTGCGCGTCACGGCGGAGCGCGCCATGAACACTCGCCTGGAAGGC
GGCTGTCAGGTGCCGATCGGCAGCTATGCGGAAATCTTCAACGGCGAAATTTGGCTGCGGGCGCTGGTTGGCGCGCCGGA
CGGTTCGGTGATGGTGCGCGGCGAACGTCGTGGTTCTCCCGAGCAGGCGGAGCAAATGGGCATCTCGCTTGCGGAAGAAC
TGCTGGAAAACGGCGCGCGCGCGATTCTGACGGCAGTTTATAACGGCGAGGCGCCCGCATGA

Protein sequence :
MLDNVLKIATRQSPLALWQAHYVKDALMATHPGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVH
SMKDVPVAFPDGLGLVTICEREDPRDAFVSNQYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLD
NGDYDAIILAVAGLKRLGLASRIRTALPPEVSLPAVGQGAIGIECRLDDARTHALLAPLNHPQTALRVTAERAMNTRLEG
GCQVPIGSYAEIFNGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENGARAILTAVYNGEAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 4e-87 63
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 4e-87 63