Gene Information

Name : SARI_03423 (SARI_03423)
Accession : YP_001572394.2
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3352067 - 3352597 bp
Length : 531 bp
Strand : -
Note : binds to single stranded DNA and PriA helcase facilitate replication restart

DNA sequence : 
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTTGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGG
CGGCGCTGTCGCCAACTTAACGCTGGCTACTTCTGAATCCTGGCGCGATAAGCAGACCGGCGAAATGAAAGAGCAAACGG
AATGGCACCGGGTGGTTATGTTCGGCAAACTGGCGGAAGTGGCCGGCGAATATCTGCGTAAAGGTTCTCAGGTGTATATC
GAAGGTCAGTTGCGTACCCGCAAGTGGACCGATCAGAGTGGCCAGGAACGATATACGACTGAAATTAACGTTCCGCAGAT
CGGCGGCGTGATGCAGATGCTGGGTGGCCGCCAGGGCGGCGGTGCGTCGGCAGGCGGCCAGCAGCAGGGCGGTTGGGGCC
AGCCGCAACAACCTCAGCAGCCGCAGAGCGGCAATCAGTTCAGTGGCGGCGCGCAGTCGCGTCCACAGCAATCCGCGCCG
GCGCCGTCTAACGAGCCGCCAATGGATTTTGACGACGATATTCCGTTCTGA

Protein sequence : 
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDKQTGEMKEQTEWHRVVMFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGQERYTTEINVPQIGGVMQMLGGRQGGGASAGGQQQGGWGQPQQPQQPQSGNQFSGGAQSRPQQSAP
APSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 7e-42 78
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 4e-41 63
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 4e-41 63
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 3e-41 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_03423 YP_001572394.2 single-stranded DNA-binding protein VFG0576 Protein 3e-53 99